Gene : Sobic.002G406300 S. bicolor v3.1.1
Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  4165
Name:  ? Sobic.002G406300 Secondary Identifier:  ? PAC:37950615
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G406300 0.5kb upstream 0.5kb upstream 4093 true Chr02: 75588548-75592640 Sorghum bicolor
Sobic.002G406300 0.5kb upstream 0.5kb upstream 500 false Chr02: 75588548-75589047 Sorghum bicolor
Sobic.002G406300 0.5kb downstream 0.5kb downstream 4093 true Chr02: 75589048-75593140 Sorghum bicolor
Sobic.002G406300 0.5kb downstream 0.5kb downstream 500 false Chr02: 75592641-75593140 Sorghum bicolor
Sobic.002G406300 1.0kb upstream 1.0kb upstream 4593 true Chr02: 75588048-75592640 Sorghum bicolor
Sobic.002G406300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75588048-75589047 Sorghum bicolor
Sobic.002G406300 1.0kb downstream 1.0kb downstream 4593 true Chr02: 75589048-75593640 Sorghum bicolor
Sobic.002G406300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75592641-75593640 Sorghum bicolor
Sobic.002G406300 2.0kb upstream 2.0kb upstream 5593 true Chr02: 75587048-75592640 Sorghum bicolor
Sobic.002G406300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75587048-75589047 Sorghum bicolor
Sobic.002G406300 2.0kb downstream 2.0kb downstream 5593 true Chr02: 75589048-75594640 Sorghum bicolor
Sobic.002G406300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75592641-75594640 Sorghum bicolor
Sobic.002G406300 5.0kb upstream 5.0kb upstream 8593 true Chr02: 75584048-75592640 Sorghum bicolor
Sobic.002G406300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75584048-75589047 Sorghum bicolor
Sobic.002G406300 5.0kb downstream 5.0kb downstream 8593 true Chr02: 75589048-75597640 Sorghum bicolor
Sobic.002G406300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75592641-75597640 Sorghum bicolor
Sobic.002G406300 10.0kb upstream 10.0kb upstream 13593 true Chr02: 75579048-75592640 Sorghum bicolor
Sobic.002G406300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75579048-75589047 Sorghum bicolor
Sobic.002G406300 10.0kb downstream 10.0kb downstream 13593 true Chr02: 75589048-75602640 Sorghum bicolor
Sobic.002G406300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75592641-75602640 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181657 5267 Panicoideae View MSA
124589600 5269 Grass View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.23     High High
cufflinks 3.806        
cufflinks 10.19     High High
cufflinks 10.04       High
cufflinks 4.189        
cufflinks 9.534        
cufflinks 4.88        
cufflinks 3.107       Low
cufflinks 11.686       High
cufflinks 12.294     High High
cufflinks 3.828        
cufflinks 5.907        
cufflinks 11.899     High High
cufflinks 5.128        
cufflinks 11.614       High
cufflinks 8.724        
cufflinks 4.358        
cufflinks 5.121        
cufflinks 7.325        
cufflinks 5.905        
cufflinks 3.117       Low
cufflinks 3.359        
cufflinks 5.179        
cufflinks 4.444        
cufflinks 4.55        
cufflinks 4.001        
cufflinks 9.277        
cufflinks 1.41       Low
cufflinks 4.104        
cufflinks 16.462     High High

0 Strain