Gene : Sobic.006G196200 S. bicolor v3.1.1
Defline:  similar to OSJNBa0086O06.9 protein Genomic Order:  2045
Name:  ? Sobic.006G196200 Secondary Identifier:  ? PAC:37947051
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G196200 0.5kb upstream 0.5kb upstream 2871 true Chr06: 54909281-54912151 Sorghum bicolor
Sobic.006G196200 0.5kb upstream 0.5kb upstream 500 false Chr06: 54909281-54909780 Sorghum bicolor
Sobic.006G196200 0.5kb downstream 0.5kb downstream 2871 true Chr06: 54909781-54912651 Sorghum bicolor
Sobic.006G196200 0.5kb downstream 0.5kb downstream 500 false Chr06: 54912152-54912651 Sorghum bicolor
Sobic.006G196200 1.0kb upstream 1.0kb upstream 3371 true Chr06: 54908781-54912151 Sorghum bicolor
Sobic.006G196200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 54908781-54909780 Sorghum bicolor
Sobic.006G196200 1.0kb downstream 1.0kb downstream 3371 true Chr06: 54909781-54913151 Sorghum bicolor
Sobic.006G196200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 54912152-54913151 Sorghum bicolor
Sobic.006G196200 2.0kb upstream 2.0kb upstream 4371 true Chr06: 54907781-54912151 Sorghum bicolor
Sobic.006G196200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 54907781-54909780 Sorghum bicolor
Sobic.006G196200 2.0kb downstream 2.0kb downstream 4371 true Chr06: 54909781-54914151 Sorghum bicolor
Sobic.006G196200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 54912152-54914151 Sorghum bicolor
Sobic.006G196200 5.0kb upstream 5.0kb upstream 7371 true Chr06: 54904781-54912151 Sorghum bicolor
Sobic.006G196200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 54904781-54909780 Sorghum bicolor
Sobic.006G196200 5.0kb downstream 5.0kb downstream 7371 true Chr06: 54909781-54917151 Sorghum bicolor
Sobic.006G196200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 54912152-54917151 Sorghum bicolor
Sobic.006G196200 10.0kb upstream 10.0kb upstream 12371 true Chr06: 54899781-54912151 Sorghum bicolor
Sobic.006G196200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 54899781-54909780 Sorghum bicolor
Sobic.006G196200 10.0kb downstream 10.0kb downstream 12371 true Chr06: 54909781-54922151 Sorghum bicolor
Sobic.006G196200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 54912152-54922151 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028162 5273 Angiosperm View MSA
122187801 5267 Panicoideae View MSA
124589577 5269 Grass View MSA
121297693 5274 Embryophyte View MSA
123335723 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.507        
cufflinks 0.618       Low
cufflinks 2.157       Low
cufflinks 8.946        
cufflinks 3.355        
cufflinks 9.095        
cufflinks 6.032        
cufflinks 4.703        
cufflinks 2.044       Low
cufflinks 2.573        
cufflinks 12.594     High  
cufflinks 16.813     High High
cufflinks 1.45       Low
cufflinks 13.796     High High
cufflinks 8.081        
cufflinks 2.992        
cufflinks 6.249        
cufflinks 5.341        
cufflinks 3.508        
cufflinks 8.069        
cufflinks 5.861        
cufflinks 23.55     High High
cufflinks 10.179        
cufflinks 10.773        
cufflinks 3.213        
cufflinks 0.915       Low
cufflinks 10.239        
cufflinks 2.311        
cufflinks 9.986        
cufflinks 7.179        

0 Strain