Gene : Sobic.002G405100 S. bicolor v3.1.1
Defline:  (1 of 1) K02357 - elongation factor Ts (tsf, TSFM) Genomic Order:  4153
Name:  ? Sobic.002G405100 Secondary Identifier:  ? PAC:37954220
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G405100 0.5kb upstream 0.5kb upstream 5561 true Chr02: 75473749-75479309 Sorghum bicolor
Sobic.002G405100 0.5kb upstream 0.5kb upstream 500 false Chr02: 75473749-75474248 Sorghum bicolor
Sobic.002G405100 0.5kb downstream 0.5kb downstream 5561 true Chr02: 75474249-75479809 Sorghum bicolor
Sobic.002G405100 0.5kb downstream 0.5kb downstream 500 false Chr02: 75479310-75479809 Sorghum bicolor
Sobic.002G405100 1.0kb upstream 1.0kb upstream 6061 true Chr02: 75473249-75479309 Sorghum bicolor
Sobic.002G405100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 75473249-75474248 Sorghum bicolor
Sobic.002G405100 1.0kb downstream 1.0kb downstream 6061 true Chr02: 75474249-75480309 Sorghum bicolor
Sobic.002G405100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 75479310-75480309 Sorghum bicolor
Sobic.002G405100 2.0kb upstream 2.0kb upstream 7061 true Chr02: 75472249-75479309 Sorghum bicolor
Sobic.002G405100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 75472249-75474248 Sorghum bicolor
Sobic.002G405100 2.0kb downstream 2.0kb downstream 7061 true Chr02: 75474249-75481309 Sorghum bicolor
Sobic.002G405100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 75479310-75481309 Sorghum bicolor
Sobic.002G405100 5.0kb upstream 5.0kb upstream 10061 true Chr02: 75469249-75479309 Sorghum bicolor
Sobic.002G405100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 75469249-75474248 Sorghum bicolor
Sobic.002G405100 5.0kb downstream 5.0kb downstream 10061 true Chr02: 75474249-75484309 Sorghum bicolor
Sobic.002G405100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 75479310-75484309 Sorghum bicolor
Sobic.002G405100 10.0kb upstream 10.0kb upstream 15061 true Chr02: 75464249-75479309 Sorghum bicolor
Sobic.002G405100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 75464249-75474248 Sorghum bicolor
Sobic.002G405100 10.0kb downstream 10.0kb downstream 15061 true Chr02: 75474249-75489309 Sorghum bicolor
Sobic.002G405100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 75479310-75489309 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197693 5267 Panicoideae View MSA
124575986 5269 Grass View MSA
122043954 5273 Angiosperm View MSA
121346485 5274 Embryophyte View MSA
123425241 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.261       Low
cufflinks 92.764     High High
cufflinks 81.83     High High
cufflinks 16.714     High  
cufflinks 12.484        
cufflinks 24.002     High  
cufflinks 98.5     High High
cufflinks 104.83     High High
cufflinks 6.572        
cufflinks 5.906        
cufflinks 2.031       Low
cufflinks 2.776        
cufflinks 6.392        
cufflinks 1.767       Low
cufflinks 18.146     High  
cufflinks 98.189     High High
cufflinks 89.331     High High
cufflinks 116.675     High High
cufflinks 92.993     High High
cufflinks 49.677     High  
cufflinks 16.415     High  
cufflinks 2.082       Low
cufflinks 2.451       Low
cufflinks 2.641       Low
cufflinks 39.375     High  
cufflinks 69.127     High High
cufflinks 2.114       Low
cufflinks 0.926       Low
cufflinks 257.025     High High
cufflinks 19.067     High  

0 Strain