Gene : Sobic.006G202000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13748//PTHR13748:SF40 - COBW-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2105
Name:  ? Sobic.006G202000 Secondary Identifier:  ? PAC:37945587
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G202000 0.5kb upstream 0.5kb upstream 2932 true Chr06: 55334112-55337043 Sorghum bicolor
Sobic.006G202000 0.5kb upstream 0.5kb upstream 500 false Chr06: 55334112-55334611 Sorghum bicolor
Sobic.006G202000 0.5kb downstream 0.5kb downstream 2932 true Chr06: 55334612-55337543 Sorghum bicolor
Sobic.006G202000 0.5kb downstream 0.5kb downstream 500 false Chr06: 55337044-55337543 Sorghum bicolor
Sobic.006G202000 1.0kb upstream 1.0kb upstream 3432 true Chr06: 55333612-55337043 Sorghum bicolor
Sobic.006G202000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55333612-55334611 Sorghum bicolor
Sobic.006G202000 1.0kb downstream 1.0kb downstream 3432 true Chr06: 55334612-55338043 Sorghum bicolor
Sobic.006G202000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55337044-55338043 Sorghum bicolor
Sobic.006G202000 2.0kb upstream 2.0kb upstream 4432 true Chr06: 55332612-55337043 Sorghum bicolor
Sobic.006G202000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55332612-55334611 Sorghum bicolor
Sobic.006G202000 2.0kb downstream 2.0kb downstream 4432 true Chr06: 55334612-55339043 Sorghum bicolor
Sobic.006G202000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55337044-55339043 Sorghum bicolor
Sobic.006G202000 5.0kb upstream 5.0kb upstream 7432 true Chr06: 55329612-55337043 Sorghum bicolor
Sobic.006G202000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55329612-55334611 Sorghum bicolor
Sobic.006G202000 5.0kb downstream 5.0kb downstream 7432 true Chr06: 55334612-55342043 Sorghum bicolor
Sobic.006G202000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55337044-55342043 Sorghum bicolor
Sobic.006G202000 10.0kb upstream 10.0kb upstream 12432 true Chr06: 55324612-55337043 Sorghum bicolor
Sobic.006G202000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55324612-55334611 Sorghum bicolor
Sobic.006G202000 10.0kb downstream 10.0kb downstream 12432 true Chr06: 55334612-55347043 Sorghum bicolor
Sobic.006G202000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55337044-55347043 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179533 5267 Panicoideae View MSA
124573696 5269 Grass View MSA
122047317 5273 Angiosperm View MSA
121346816 5274 Embryophyte View MSA
123428327 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03        
cufflinks 0.257       Low
cufflinks 0.505       Low
cufflinks 1.154        
cufflinks 5.182       High
cufflinks 1.522        
cufflinks 1.169        
cufflinks 1.356        
cufflinks 2.547        
cufflinks 2.443        
cufflinks 0.969        
cufflinks 1.174        
cufflinks 1.543        
cufflinks 0.554       Low
cufflinks 2.034        
cufflinks 0.372       Low
cufflinks 1.077        
cufflinks 1.051        
cufflinks 0.444       Low
cufflinks 1.882        
cufflinks 10.121       High
cufflinks 1.063        
cufflinks 0.807        
cufflinks 0.778        
cufflinks 0.494       Low
cufflinks 0.35       Low
cufflinks 1.373        
cufflinks 1.252        
cufflinks 1.096        
cufflinks 2.43        

0 Strain