Gene : Sobic.002G396500 S. bicolor v3.1.1
Defline:  (1 of 1) K08874 - transformation/transcription domain-associated protein (TRRAP) Genomic Order:  4066
Name:  ? Sobic.002G396500 Secondary Identifier:  ? PAC:37950057
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G396500 0.5kb upstream 0.5kb upstream 22493 true Chr02: 74832322-74854814 Sorghum bicolor
Sobic.002G396500 0.5kb upstream 0.5kb upstream 500 false Chr02: 74854315-74854814 Sorghum bicolor
Sobic.002G396500 0.5kb downstream 0.5kb downstream 22493 true Chr02: 74831822-74854314 Sorghum bicolor
Sobic.002G396500 0.5kb downstream 0.5kb downstream 500 false Chr02: 74831822-74832321 Sorghum bicolor
Sobic.002G396500 1.0kb upstream 1.0kb upstream 22993 true Chr02: 74832322-74855314 Sorghum bicolor
Sobic.002G396500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 74854315-74855314 Sorghum bicolor
Sobic.002G396500 1.0kb downstream 1.0kb downstream 22993 true Chr02: 74831322-74854314 Sorghum bicolor
Sobic.002G396500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 74831322-74832321 Sorghum bicolor
Sobic.002G396500 2.0kb upstream 2.0kb upstream 23993 true Chr02: 74832322-74856314 Sorghum bicolor
Sobic.002G396500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 74854315-74856314 Sorghum bicolor
Sobic.002G396500 2.0kb downstream 2.0kb downstream 23993 true Chr02: 74830322-74854314 Sorghum bicolor
Sobic.002G396500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 74830322-74832321 Sorghum bicolor
Sobic.002G396500 5.0kb upstream 5.0kb upstream 26993 true Chr02: 74832322-74859314 Sorghum bicolor
Sobic.002G396500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 74854315-74859314 Sorghum bicolor
Sobic.002G396500 5.0kb downstream 5.0kb downstream 26993 true Chr02: 74827322-74854314 Sorghum bicolor
Sobic.002G396500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 74827322-74832321 Sorghum bicolor
Sobic.002G396500 10.0kb upstream 10.0kb upstream 31993 true Chr02: 74832322-74864314 Sorghum bicolor
Sobic.002G396500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 74854315-74864314 Sorghum bicolor
Sobic.002G396500 10.0kb downstream 10.0kb downstream 31993 true Chr02: 74822322-74854314 Sorghum bicolor
Sobic.002G396500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 74822322-74832321 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122178433 5267 Panicoideae View MSA
124581749 5269 Grass View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.977       Low
cufflinks 3.192       Low
cufflinks 9.018        
cufflinks 9.736        
cufflinks 23.982     High  
cufflinks 9.321        
cufflinks 16.992     High  
cufflinks 4.611       Low
cufflinks 20.447     High  
cufflinks 20.638     High  
cufflinks 26.878     High  
cufflinks 36.119     High High
cufflinks 15.108     High  
cufflinks 20.437     High  
cufflinks 24.495     High  
cufflinks 6.583       Low
cufflinks 13.074     High  
cufflinks 13.69     High  
cufflinks 8.902        
cufflinks 14.961     High  
cufflinks 63.391     High High
cufflinks 18.439     High  
cufflinks 22.514     High  
cufflinks 23.335     High  
cufflinks 9.95     High  
cufflinks 3.494       Low
cufflinks 26.906     High  
cufflinks 4.754       Low
cufflinks 8.389        
cufflinks 38.133     High High

0 Strain