Gene : Sobic.006G207300 S. bicolor v3.1.1
Defline:  (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) Genomic Order:  2158
Name:  ? Sobic.006G207300 Secondary Identifier:  ? PAC:37948399
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G207300 0.5kb upstream 0.5kb upstream 12112 true Chr06: 55698804-55710915 Sorghum bicolor
Sobic.006G207300 0.5kb upstream 0.5kb upstream 500 false Chr06: 55710416-55710915 Sorghum bicolor
Sobic.006G207300 0.5kb downstream 0.5kb downstream 12112 true Chr06: 55698304-55710415 Sorghum bicolor
Sobic.006G207300 0.5kb downstream 0.5kb downstream 500 false Chr06: 55698304-55698803 Sorghum bicolor
Sobic.006G207300 1.0kb upstream 1.0kb upstream 12612 true Chr06: 55698804-55711415 Sorghum bicolor
Sobic.006G207300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55710416-55711415 Sorghum bicolor
Sobic.006G207300 1.0kb downstream 1.0kb downstream 12612 true Chr06: 55697804-55710415 Sorghum bicolor
Sobic.006G207300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55697804-55698803 Sorghum bicolor
Sobic.006G207300 2.0kb upstream 2.0kb upstream 13612 true Chr06: 55698804-55712415 Sorghum bicolor
Sobic.006G207300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55710416-55712415 Sorghum bicolor
Sobic.006G207300 2.0kb downstream 2.0kb downstream 13612 true Chr06: 55696804-55710415 Sorghum bicolor
Sobic.006G207300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55696804-55698803 Sorghum bicolor
Sobic.006G207300 5.0kb upstream 5.0kb upstream 16612 true Chr06: 55698804-55715415 Sorghum bicolor
Sobic.006G207300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55710416-55715415 Sorghum bicolor
Sobic.006G207300 5.0kb downstream 5.0kb downstream 16612 true Chr06: 55693804-55710415 Sorghum bicolor
Sobic.006G207300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55693804-55698803 Sorghum bicolor
Sobic.006G207300 10.0kb upstream 10.0kb upstream 21612 true Chr06: 55698804-55720415 Sorghum bicolor
Sobic.006G207300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55710416-55720415 Sorghum bicolor
Sobic.006G207300 10.0kb downstream 10.0kb downstream 21612 true Chr06: 55688804-55710415 Sorghum bicolor
Sobic.006G207300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55688804-55698803 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190587 5267 Panicoideae View MSA
124581424 5269 Grass View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.022        
cufflinks 0.956       Low
cufflinks 2.585        
cufflinks 3.603        
cufflinks 6.951       High
cufflinks 4.767        
cufflinks 2.159        
cufflinks 1.219       Low
cufflinks 8.549       High
cufflinks 7.23       High
cufflinks 3.879        
cufflinks 5.112        
cufflinks 4.812        
cufflinks 3.868        
cufflinks 4.523        
cufflinks 1.509       Low
cufflinks 1.9        
cufflinks 2.103        
cufflinks 2.05        
cufflinks 2.327        
cufflinks 9.527       High
cufflinks 3.631        
cufflinks 3.506        
cufflinks 3.606        
cufflinks 1.752       Low
cufflinks 1.059       Low
cufflinks 5.646        
cufflinks 4.672        
cufflinks 1.493       Low
cufflinks 6.34       High

0 Strain