Gene : Sobic.006G211200 S. bicolor v3.1.1
Defline:  similar to OSJNBa0085I10.17 protein Genomic Order:  2198
Name:  ? Sobic.006G211200 Secondary Identifier:  ? PAC:37948936
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G211200 0.5kb upstream 0.5kb upstream 1560 true Chr06: 56061904-56063463 Sorghum bicolor
Sobic.006G211200 0.5kb upstream 0.5kb upstream 500 false Chr06: 56061904-56062403 Sorghum bicolor
Sobic.006G211200 0.5kb downstream 0.5kb downstream 1560 true Chr06: 56062404-56063963 Sorghum bicolor
Sobic.006G211200 0.5kb downstream 0.5kb downstream 500 false Chr06: 56063464-56063963 Sorghum bicolor
Sobic.006G211200 1.0kb upstream 1.0kb upstream 2060 true Chr06: 56061404-56063463 Sorghum bicolor
Sobic.006G211200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56061404-56062403 Sorghum bicolor
Sobic.006G211200 1.0kb downstream 1.0kb downstream 2060 true Chr06: 56062404-56064463 Sorghum bicolor
Sobic.006G211200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56063464-56064463 Sorghum bicolor
Sobic.006G211200 2.0kb upstream 2.0kb upstream 3060 true Chr06: 56060404-56063463 Sorghum bicolor
Sobic.006G211200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56060404-56062403 Sorghum bicolor
Sobic.006G211200 2.0kb downstream 2.0kb downstream 3060 true Chr06: 56062404-56065463 Sorghum bicolor
Sobic.006G211200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56063464-56065463 Sorghum bicolor
Sobic.006G211200 5.0kb upstream 5.0kb upstream 6060 true Chr06: 56057404-56063463 Sorghum bicolor
Sobic.006G211200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56057404-56062403 Sorghum bicolor
Sobic.006G211200 5.0kb downstream 5.0kb downstream 6060 true Chr06: 56062404-56068463 Sorghum bicolor
Sobic.006G211200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56063464-56068463 Sorghum bicolor
Sobic.006G211200 10.0kb upstream 10.0kb upstream 11060 true Chr06: 56052404-56063463 Sorghum bicolor
Sobic.006G211200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56052404-56062403 Sorghum bicolor
Sobic.006G211200 10.0kb downstream 10.0kb downstream 11060 true Chr06: 56062404-56073463 Sorghum bicolor
Sobic.006G211200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56063464-56073463 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199614 5267 Panicoideae View MSA
124583200 5269 Grass View MSA
122049403 5273 Angiosperm View MSA
121349103 5274 Embryophyte View MSA
123381168 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.995     High High
cufflinks 2.521       Low
cufflinks 9.489        
cufflinks 21.623     High  
cufflinks 17.559     High  
cufflinks 39.573     High High
cufflinks 7.63        
cufflinks 2.895       Low
cufflinks 13.157     High  
cufflinks 9.934        
cufflinks 12.514     High  
cufflinks 7.933        
cufflinks 8.47        
cufflinks 9.496        
cufflinks 11.537        
cufflinks 8.928        
cufflinks 9.618        
cufflinks 10.477        
cufflinks 10.478        
cufflinks 12.086     High  
cufflinks 21.67     High  
cufflinks 22.895     High  
cufflinks 11.235        
cufflinks 10.312        
cufflinks 3.381       Low
cufflinks 1.508       Low
cufflinks 11.587     High  
cufflinks 312.216     High High
cufflinks 7.655        
cufflinks 17.828     High  

0 Strain