Gene : Sobic.002G385900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12281:SF10 - DCN1-LIKE PROTEIN 1 Genomic Order:  3954
Name:  ? Sobic.002G385900 Secondary Identifier:  ? PAC:37955572
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G385900 0.5kb upstream 0.5kb upstream 4730 true Chr02: 74052186-74056915 Sorghum bicolor
Sobic.002G385900 0.5kb upstream 0.5kb upstream 500 false Chr02: 74056416-74056915 Sorghum bicolor
Sobic.002G385900 0.5kb downstream 0.5kb downstream 4730 true Chr02: 74051686-74056415 Sorghum bicolor
Sobic.002G385900 0.5kb downstream 0.5kb downstream 500 false Chr02: 74051686-74052185 Sorghum bicolor
Sobic.002G385900 1.0kb upstream 1.0kb upstream 5230 true Chr02: 74052186-74057415 Sorghum bicolor
Sobic.002G385900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 74056416-74057415 Sorghum bicolor
Sobic.002G385900 1.0kb downstream 1.0kb downstream 5230 true Chr02: 74051186-74056415 Sorghum bicolor
Sobic.002G385900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 74051186-74052185 Sorghum bicolor
Sobic.002G385900 2.0kb upstream 2.0kb upstream 6230 true Chr02: 74052186-74058415 Sorghum bicolor
Sobic.002G385900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 74056416-74058415 Sorghum bicolor
Sobic.002G385900 2.0kb downstream 2.0kb downstream 6230 true Chr02: 74050186-74056415 Sorghum bicolor
Sobic.002G385900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 74050186-74052185 Sorghum bicolor
Sobic.002G385900 5.0kb upstream 5.0kb upstream 9230 true Chr02: 74052186-74061415 Sorghum bicolor
Sobic.002G385900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 74056416-74061415 Sorghum bicolor
Sobic.002G385900 5.0kb downstream 5.0kb downstream 9230 true Chr02: 74047186-74056415 Sorghum bicolor
Sobic.002G385900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 74047186-74052185 Sorghum bicolor
Sobic.002G385900 10.0kb upstream 10.0kb upstream 14230 true Chr02: 74052186-74066415 Sorghum bicolor
Sobic.002G385900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 74056416-74066415 Sorghum bicolor
Sobic.002G385900 10.0kb downstream 10.0kb downstream 14230 true Chr02: 74042186-74056415 Sorghum bicolor
Sobic.002G385900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 74042186-74052185 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193045 5267 Panicoideae View MSA
124571705 5269 Grass View MSA
122049788 5273 Angiosperm View MSA
121347984 5274 Embryophyte View MSA
123426015 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.157        
cufflinks 3.203       Low
cufflinks 5.912        
cufflinks 11.997       High
cufflinks 6.49        
cufflinks 17.627     High High
cufflinks 6.485        
cufflinks 4.3       Low
cufflinks 11.994       High
cufflinks 12.061     High High
cufflinks 6.978        
cufflinks 7.347        
cufflinks 10.792        
cufflinks 7.485        
cufflinks 9.744        
cufflinks 7.194        
cufflinks 7.562        
cufflinks 7.611        
cufflinks 4.602       Low
cufflinks 10.154        
cufflinks 7.349        
cufflinks 9.833        
cufflinks 8.676        
cufflinks 7.848        
cufflinks 5.221       Low
cufflinks 3.244       Low
cufflinks 6.133        
cufflinks 11.893     High High
cufflinks 6.12        
cufflinks 9.472        

0 Strain