Gene : Sobic.006G209850 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12706:SF13 - RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  2184
Name:  ? Sobic.006G209850 Secondary Identifier:  ? PAC:37946789
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G209850 0.5kb upstream 0.5kb upstream 25002 true Chr06: 55939037-55964038 Sorghum bicolor
Sobic.006G209850 0.5kb upstream 0.5kb upstream 500 false Chr06: 55963539-55964038 Sorghum bicolor
Sobic.006G209850 0.5kb downstream 0.5kb downstream 25002 true Chr06: 55938537-55963538 Sorghum bicolor
Sobic.006G209850 0.5kb downstream 0.5kb downstream 500 false Chr06: 55938537-55939036 Sorghum bicolor
Sobic.006G209850 1.0kb upstream 1.0kb upstream 25502 true Chr06: 55939037-55964538 Sorghum bicolor
Sobic.006G209850 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55963539-55964538 Sorghum bicolor
Sobic.006G209850 1.0kb downstream 1.0kb downstream 25502 true Chr06: 55938037-55963538 Sorghum bicolor
Sobic.006G209850 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55938037-55939036 Sorghum bicolor
Sobic.006G209850 2.0kb upstream 2.0kb upstream 26502 true Chr06: 55939037-55965538 Sorghum bicolor
Sobic.006G209850 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55963539-55965538 Sorghum bicolor
Sobic.006G209850 2.0kb downstream 2.0kb downstream 26502 true Chr06: 55937037-55963538 Sorghum bicolor
Sobic.006G209850 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55937037-55939036 Sorghum bicolor
Sobic.006G209850 5.0kb upstream 5.0kb upstream 29502 true Chr06: 55939037-55968538 Sorghum bicolor
Sobic.006G209850 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55963539-55968538 Sorghum bicolor
Sobic.006G209850 5.0kb downstream 5.0kb downstream 29502 true Chr06: 55934037-55963538 Sorghum bicolor
Sobic.006G209850 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55934037-55939036 Sorghum bicolor
Sobic.006G209850 10.0kb upstream 10.0kb upstream 34502 true Chr06: 55939037-55973538 Sorghum bicolor
Sobic.006G209850 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55963539-55973538 Sorghum bicolor
Sobic.006G209850 10.0kb downstream 10.0kb downstream 34502 true Chr06: 55929037-55963538 Sorghum bicolor
Sobic.006G209850 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55929037-55939036 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178202 5267 Panicoideae View MSA
124581881 5269 Grass View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.318       Low
cufflinks 1.212        
cufflinks 1.588        
cufflinks 1.945        
cufflinks 2.659       High
cufflinks 2.099        
cufflinks 0.86       Low
cufflinks 1.003        
cufflinks 2.881       High
cufflinks 2.604       High
cufflinks 1.629        
cufflinks 1.395        
cufflinks 2.02        
cufflinks 0.896       Low
cufflinks 2.058        
cufflinks 1.275        
cufflinks 0.717       Low
cufflinks 0.849       Low
cufflinks 1.591        
cufflinks 0.998        
cufflinks 3.251       High
cufflinks 1.193        
cufflinks 0.979        
cufflinks 1.005        
cufflinks 1.808        
cufflinks 1.221        
cufflinks 1.895        
cufflinks 1.022        
cufflinks 1.242        
cufflinks 2.056        

0 Strain