Gene : Sobic.002G376200 S. bicolor v3.1.1
Defline:  (1 of 2) 2.5.1.15 - Dihydropteroate synthase / Dihydropteroate pyrophosphorylase Genomic Order:  3849
Name:  ? Sobic.002G376200 Secondary Identifier:  ? PAC:37949791
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6147 Sorghum bicolor pathologic  
Sbicolor PWY-6612 Sorghum bicolor pathologic  
Sbicolor PWY-6614 Sorghum bicolor pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G376200 0.5kb upstream 0.5kb upstream 2228 true Chr02: 73355790-73358017 Sorghum bicolor
Sobic.002G376200 0.5kb upstream 0.5kb upstream 500 false Chr02: 73357518-73358017 Sorghum bicolor
Sobic.002G376200 0.5kb downstream 0.5kb downstream 2228 true Chr02: 73355290-73357517 Sorghum bicolor
Sobic.002G376200 0.5kb downstream 0.5kb downstream 500 false Chr02: 73355290-73355789 Sorghum bicolor
Sobic.002G376200 1.0kb upstream 1.0kb upstream 2728 true Chr02: 73355790-73358517 Sorghum bicolor
Sobic.002G376200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 73357518-73358517 Sorghum bicolor
Sobic.002G376200 1.0kb downstream 1.0kb downstream 2728 true Chr02: 73354790-73357517 Sorghum bicolor
Sobic.002G376200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 73354790-73355789 Sorghum bicolor
Sobic.002G376200 2.0kb upstream 2.0kb upstream 3728 true Chr02: 73355790-73359517 Sorghum bicolor
Sobic.002G376200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 73357518-73359517 Sorghum bicolor
Sobic.002G376200 2.0kb downstream 2.0kb downstream 3728 true Chr02: 73353790-73357517 Sorghum bicolor
Sobic.002G376200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 73353790-73355789 Sorghum bicolor
Sobic.002G376200 5.0kb upstream 5.0kb upstream 6728 true Chr02: 73355790-73362517 Sorghum bicolor
Sobic.002G376200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 73357518-73362517 Sorghum bicolor
Sobic.002G376200 5.0kb downstream 5.0kb downstream 6728 true Chr02: 73350790-73357517 Sorghum bicolor
Sobic.002G376200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 73350790-73355789 Sorghum bicolor
Sobic.002G376200 10.0kb upstream 10.0kb upstream 11728 true Chr02: 73355790-73367517 Sorghum bicolor
Sobic.002G376200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 73357518-73367517 Sorghum bicolor
Sobic.002G376200 10.0kb downstream 10.0kb downstream 11728 true Chr02: 73345790-73357517 Sorghum bicolor
Sobic.002G376200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 73345790-73355789 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121893275 5273 Angiosperm View MSA
122173408 5267 Panicoideae View MSA
124464141 5269 Grass View MSA
121163878 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.199        
cufflinks 0.676       Low
cufflinks 0.802       Low
cufflinks 1.447       Low
cufflinks 8.177        
cufflinks 6.302        
cufflinks 6.66        
cufflinks 2.623        
cufflinks 9.389        
cufflinks 9.864        
cufflinks 9.286        
cufflinks 12.128     High  
cufflinks 10.686        
cufflinks 9.081        
cufflinks 6.655        
cufflinks 1.428       Low
cufflinks 7.706        
cufflinks 8.224        
cufflinks 2.314        
cufflinks 9.507        
cufflinks 17.447     High High
cufflinks 9.232        
cufflinks 10.239        
cufflinks 9.799        
cufflinks 0.911       Low
cufflinks 0.429       Low
cufflinks 6.751        
cufflinks 0.625       Low
cufflinks 6.841        
cufflinks 9.209        

0 Strain