Gene : Sobic.006G231800 S. bicolor v3.1.1
Defline:  (1 of 2) K10865 - double-strand break repair protein MRE11 (MRE11) Genomic Order:  2419
Name:  ? Sobic.006G231800 Secondary Identifier:  ? PAC:37945965
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G231800 0.5kb upstream 0.5kb upstream 6330 true Chr06: 57459601-57465930 Sorghum bicolor
Sobic.006G231800 0.5kb upstream 0.5kb upstream 500 false Chr06: 57459601-57460100 Sorghum bicolor
Sobic.006G231800 0.5kb downstream 0.5kb downstream 6330 true Chr06: 57460101-57466430 Sorghum bicolor
Sobic.006G231800 0.5kb downstream 0.5kb downstream 500 false Chr06: 57465931-57466430 Sorghum bicolor
Sobic.006G231800 1.0kb upstream 1.0kb upstream 6830 true Chr06: 57459101-57465930 Sorghum bicolor
Sobic.006G231800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57459101-57460100 Sorghum bicolor
Sobic.006G231800 1.0kb downstream 1.0kb downstream 6830 true Chr06: 57460101-57466930 Sorghum bicolor
Sobic.006G231800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57465931-57466930 Sorghum bicolor
Sobic.006G231800 2.0kb upstream 2.0kb upstream 7830 true Chr06: 57458101-57465930 Sorghum bicolor
Sobic.006G231800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57458101-57460100 Sorghum bicolor
Sobic.006G231800 2.0kb downstream 2.0kb downstream 7830 true Chr06: 57460101-57467930 Sorghum bicolor
Sobic.006G231800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57465931-57467930 Sorghum bicolor
Sobic.006G231800 5.0kb upstream 5.0kb upstream 10830 true Chr06: 57455101-57465930 Sorghum bicolor
Sobic.006G231800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57455101-57460100 Sorghum bicolor
Sobic.006G231800 5.0kb downstream 5.0kb downstream 10830 true Chr06: 57460101-57470930 Sorghum bicolor
Sobic.006G231800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57465931-57470930 Sorghum bicolor
Sobic.006G231800 10.0kb upstream 10.0kb upstream 15830 true Chr06: 57450101-57465930 Sorghum bicolor
Sobic.006G231800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57450101-57460100 Sorghum bicolor
Sobic.006G231800 10.0kb downstream 10.0kb downstream 15830 true Chr06: 57460101-57475930 Sorghum bicolor
Sobic.006G231800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57465931-57475930 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184566 5267 Panicoideae View MSA
124578296 5269 Grass View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.796        
cufflinks 0.217       Low
cufflinks 1.802        
cufflinks 3.126        
cufflinks 4.783       High
cufflinks 3.274        
cufflinks 1.671        
cufflinks 0.327       Low
cufflinks 4.857       High
cufflinks 4.734        
cufflinks 2.453        
cufflinks 3.583        
cufflinks 2.668        
cufflinks 2.146        
cufflinks 2.682        
cufflinks 0.96        
cufflinks 1.322        
cufflinks 1.72        
cufflinks 1.183        
cufflinks 1.775        
cufflinks 11.428       High
cufflinks 2.515        
cufflinks 2.48        
cufflinks 2.565        
cufflinks 0.609       Low
cufflinks 0.161       Low
cufflinks 3.352        
cufflinks 3.248        
cufflinks 0.794       Low
cufflinks 3.799        

0 Strain