Gene : Sobic.002G367100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31413//PTHR31413:SF0 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP3 Genomic Order:  3755
Name:  ? Sobic.002G367100 Secondary Identifier:  ? PAC:37951301
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G367100 0.5kb upstream 0.5kb upstream 3874 true Chr02: 72683938-72687811 Sorghum bicolor
Sobic.002G367100 0.5kb upstream 0.5kb upstream 500 false Chr02: 72687312-72687811 Sorghum bicolor
Sobic.002G367100 0.5kb downstream 0.5kb downstream 3874 true Chr02: 72683438-72687311 Sorghum bicolor
Sobic.002G367100 0.5kb downstream 0.5kb downstream 500 false Chr02: 72683438-72683937 Sorghum bicolor
Sobic.002G367100 1.0kb upstream 1.0kb upstream 4374 true Chr02: 72683938-72688311 Sorghum bicolor
Sobic.002G367100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72687312-72688311 Sorghum bicolor
Sobic.002G367100 1.0kb downstream 1.0kb downstream 4374 true Chr02: 72682938-72687311 Sorghum bicolor
Sobic.002G367100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72682938-72683937 Sorghum bicolor
Sobic.002G367100 2.0kb upstream 2.0kb upstream 5374 true Chr02: 72683938-72689311 Sorghum bicolor
Sobic.002G367100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72687312-72689311 Sorghum bicolor
Sobic.002G367100 2.0kb downstream 2.0kb downstream 5374 true Chr02: 72681938-72687311 Sorghum bicolor
Sobic.002G367100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72681938-72683937 Sorghum bicolor
Sobic.002G367100 5.0kb upstream 5.0kb upstream 8374 true Chr02: 72683938-72692311 Sorghum bicolor
Sobic.002G367100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72687312-72692311 Sorghum bicolor
Sobic.002G367100 5.0kb downstream 5.0kb downstream 8374 true Chr02: 72678938-72687311 Sorghum bicolor
Sobic.002G367100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72678938-72683937 Sorghum bicolor
Sobic.002G367100 10.0kb upstream 10.0kb upstream 13374 true Chr02: 72683938-72697311 Sorghum bicolor
Sobic.002G367100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72687312-72697311 Sorghum bicolor
Sobic.002G367100 10.0kb downstream 10.0kb downstream 13374 true Chr02: 72673938-72687311 Sorghum bicolor
Sobic.002G367100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72673938-72683937 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196772 5267 Panicoideae View MSA
124587117 5269 Grass View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.147        
cufflinks 30.228     High High
cufflinks 11.786     High  
cufflinks 14.481     High  
cufflinks 4.8        
cufflinks 38.51     High High
cufflinks 4.969        
cufflinks 5.009        
cufflinks 12.096        
cufflinks 12.313     High  
cufflinks 6.355        
cufflinks 3.711        
cufflinks 11.459     High  
cufflinks 4.52        
cufflinks 13.259     High  
cufflinks 14.869     High  
cufflinks 6.292        
cufflinks 4.889        
cufflinks 15.846     High High
cufflinks 4.324        
cufflinks 4.276        
cufflinks 5.967        
cufflinks 3.909        
cufflinks 4.026        
cufflinks 31.519     High High
cufflinks 11.387     High  
cufflinks 5.904        
cufflinks 6.351        
cufflinks 4.011        
cufflinks 12.006     High  

0 Strain