Gene : Sobic.006G233000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  2431
Name:  ? Sobic.006G233000 Secondary Identifier:  ? PAC:37948147
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G233000 0.5kb upstream 0.5kb upstream 3490 true Chr06: 57521478-57524967 Sorghum bicolor
Sobic.006G233000 0.5kb upstream 0.5kb upstream 500 false Chr06: 57524468-57524967 Sorghum bicolor
Sobic.006G233000 0.5kb downstream 0.5kb downstream 3490 true Chr06: 57520978-57524467 Sorghum bicolor
Sobic.006G233000 0.5kb downstream 0.5kb downstream 500 false Chr06: 57520978-57521477 Sorghum bicolor
Sobic.006G233000 1.0kb upstream 1.0kb upstream 3990 true Chr06: 57521478-57525467 Sorghum bicolor
Sobic.006G233000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57524468-57525467 Sorghum bicolor
Sobic.006G233000 1.0kb downstream 1.0kb downstream 3990 true Chr06: 57520478-57524467 Sorghum bicolor
Sobic.006G233000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57520478-57521477 Sorghum bicolor
Sobic.006G233000 2.0kb upstream 2.0kb upstream 4990 true Chr06: 57521478-57526467 Sorghum bicolor
Sobic.006G233000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57524468-57526467 Sorghum bicolor
Sobic.006G233000 2.0kb downstream 2.0kb downstream 4990 true Chr06: 57519478-57524467 Sorghum bicolor
Sobic.006G233000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57519478-57521477 Sorghum bicolor
Sobic.006G233000 5.0kb upstream 5.0kb upstream 7990 true Chr06: 57521478-57529467 Sorghum bicolor
Sobic.006G233000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57524468-57529467 Sorghum bicolor
Sobic.006G233000 5.0kb downstream 5.0kb downstream 7990 true Chr06: 57516478-57524467 Sorghum bicolor
Sobic.006G233000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57516478-57521477 Sorghum bicolor
Sobic.006G233000 10.0kb upstream 10.0kb upstream 12990 true Chr06: 57521478-57534467 Sorghum bicolor
Sobic.006G233000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57524468-57534467 Sorghum bicolor
Sobic.006G233000 10.0kb downstream 10.0kb downstream 12990 true Chr06: 57511478-57524467 Sorghum bicolor
Sobic.006G233000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57511478-57521477 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178389 5267 Panicoideae View MSA
124579847 5269 Grass View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.809       High
cufflinks 1.993       Low
cufflinks 2.844       Low
cufflinks 4.206        
cufflinks 6.256        
cufflinks 4.679        
cufflinks 5.378        
cufflinks 2.283       Low
cufflinks 8.943       High
cufflinks 8.807       High
cufflinks 6.503        
cufflinks 7.268        
cufflinks 6.675        
cufflinks 6.972        
cufflinks 6.696        
cufflinks 2.892       Low
cufflinks 5.639        
cufflinks 5.124        
cufflinks 6.098        
cufflinks 6.432        
cufflinks 10.491       High
cufflinks 7.356        
cufflinks 7.519        
cufflinks 7.939        
cufflinks 3.675        
cufflinks 1.581       Low
cufflinks 4.952        
cufflinks 2.512       Low
cufflinks 4.479        
cufflinks 9.851       High

0 Strain