Gene : Sobic.002G370200 S. bicolor v3.1.1
Defline:  (1 of 15) PF05641 - Agenet domain (Agenet) Genomic Order:  3787
Name:  ? Sobic.002G370200 Secondary Identifier:  ? PAC:37955480
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G370200 0.5kb upstream 0.5kb upstream 5377 true Chr02: 72937479-72942855 Sorghum bicolor
Sobic.002G370200 0.5kb upstream 0.5kb upstream 500 false Chr02: 72937479-72937978 Sorghum bicolor
Sobic.002G370200 0.5kb downstream 0.5kb downstream 5377 true Chr02: 72937979-72943355 Sorghum bicolor
Sobic.002G370200 0.5kb downstream 0.5kb downstream 500 false Chr02: 72942856-72943355 Sorghum bicolor
Sobic.002G370200 1.0kb upstream 1.0kb upstream 5877 true Chr02: 72936979-72942855 Sorghum bicolor
Sobic.002G370200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72936979-72937978 Sorghum bicolor
Sobic.002G370200 1.0kb downstream 1.0kb downstream 5877 true Chr02: 72937979-72943855 Sorghum bicolor
Sobic.002G370200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72942856-72943855 Sorghum bicolor
Sobic.002G370200 2.0kb upstream 2.0kb upstream 6877 true Chr02: 72935979-72942855 Sorghum bicolor
Sobic.002G370200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72935979-72937978 Sorghum bicolor
Sobic.002G370200 2.0kb downstream 2.0kb downstream 6877 true Chr02: 72937979-72944855 Sorghum bicolor
Sobic.002G370200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72942856-72944855 Sorghum bicolor
Sobic.002G370200 5.0kb upstream 5.0kb upstream 9877 true Chr02: 72932979-72942855 Sorghum bicolor
Sobic.002G370200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72932979-72937978 Sorghum bicolor
Sobic.002G370200 5.0kb downstream 5.0kb downstream 9877 true Chr02: 72937979-72947855 Sorghum bicolor
Sobic.002G370200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72942856-72947855 Sorghum bicolor
Sobic.002G370200 10.0kb upstream 10.0kb upstream 14877 true Chr02: 72927979-72942855 Sorghum bicolor
Sobic.002G370200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72927979-72937978 Sorghum bicolor
Sobic.002G370200 10.0kb downstream 10.0kb downstream 14877 true Chr02: 72937979-72952855 Sorghum bicolor
Sobic.002G370200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72942856-72952855 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179720 5267 Panicoideae View MSA
124572072 5269 Grass View MSA
122047439 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.529     High  
cufflinks 11.629     High Low
cufflinks 16.313     High  
cufflinks 17.813     High  
cufflinks 21.63     High  
cufflinks 25.675     High High
cufflinks 17.295     High  
cufflinks 10.779     High Low
cufflinks 27.958     High High
cufflinks 29.093     High High
cufflinks 14.172     High  
cufflinks 24.444     High High
cufflinks 29.126     High High
cufflinks 18.303     High  
cufflinks 24.46     High High
cufflinks 14.238     High  
cufflinks 16.036     High  
cufflinks 15.564     High  
cufflinks 16.736     High  
cufflinks 17.602     High  
cufflinks 33.224     High High
cufflinks 14.702     High  
cufflinks 21.747     High  
cufflinks 19.943     High  
cufflinks 17.865     High  
cufflinks 10.07     High Low
cufflinks 13.344     High Low
cufflinks 15.207     High  
cufflinks 12.704     High Low
cufflinks 26.678     High High

0 Strain