Gene : Sobic.002G368500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33417:SF1 - B12D PROTEIN Genomic Order:  3770
Name:  ? Sobic.002G368500 Secondary Identifier:  ? PAC:37949594
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G368500 0.5kb upstream 0.5kb upstream 1414 true Chr02: 72803463-72804876 Sorghum bicolor
Sobic.002G368500 0.5kb upstream 0.5kb upstream 500 false Chr02: 72803463-72803962 Sorghum bicolor
Sobic.002G368500 0.5kb downstream 0.5kb downstream 1414 true Chr02: 72803963-72805376 Sorghum bicolor
Sobic.002G368500 0.5kb downstream 0.5kb downstream 500 false Chr02: 72804877-72805376 Sorghum bicolor
Sobic.002G368500 1.0kb upstream 1.0kb upstream 1914 true Chr02: 72802963-72804876 Sorghum bicolor
Sobic.002G368500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72802963-72803962 Sorghum bicolor
Sobic.002G368500 1.0kb downstream 1.0kb downstream 1914 true Chr02: 72803963-72805876 Sorghum bicolor
Sobic.002G368500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72804877-72805876 Sorghum bicolor
Sobic.002G368500 2.0kb upstream 2.0kb upstream 2914 true Chr02: 72801963-72804876 Sorghum bicolor
Sobic.002G368500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72801963-72803962 Sorghum bicolor
Sobic.002G368500 2.0kb downstream 2.0kb downstream 2914 true Chr02: 72803963-72806876 Sorghum bicolor
Sobic.002G368500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72804877-72806876 Sorghum bicolor
Sobic.002G368500 5.0kb upstream 5.0kb upstream 5914 true Chr02: 72798963-72804876 Sorghum bicolor
Sobic.002G368500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72798963-72803962 Sorghum bicolor
Sobic.002G368500 5.0kb downstream 5.0kb downstream 5914 true Chr02: 72803963-72809876 Sorghum bicolor
Sobic.002G368500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72804877-72809876 Sorghum bicolor
Sobic.002G368500 10.0kb upstream 10.0kb upstream 10914 true Chr02: 72793963-72804876 Sorghum bicolor
Sobic.002G368500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72793963-72803962 Sorghum bicolor
Sobic.002G368500 10.0kb downstream 10.0kb downstream 10914 true Chr02: 72803963-72814876 Sorghum bicolor
Sobic.002G368500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72804877-72814876 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179730 5267 Panicoideae View MSA
124582798 5269 Grass View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.505       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.174        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.865     High High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.46        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain