Gene : Sobic.002G363200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12286:SF5 - SACCHAROPINE DEHYDROGENASE-LIKE OXIDOREDUCTASE Genomic Order:  3716
Name:  ? Sobic.002G363200 Secondary Identifier:  ? PAC:37953309
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G363200 0.5kb upstream 0.5kb upstream 5881 true Chr02: 72438182-72444062 Sorghum bicolor
Sobic.002G363200 0.5kb upstream 0.5kb upstream 500 false Chr02: 72438182-72438681 Sorghum bicolor
Sobic.002G363200 0.5kb downstream 0.5kb downstream 5881 true Chr02: 72438682-72444562 Sorghum bicolor
Sobic.002G363200 0.5kb downstream 0.5kb downstream 500 false Chr02: 72444063-72444562 Sorghum bicolor
Sobic.002G363200 1.0kb upstream 1.0kb upstream 6381 true Chr02: 72437682-72444062 Sorghum bicolor
Sobic.002G363200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72437682-72438681 Sorghum bicolor
Sobic.002G363200 1.0kb downstream 1.0kb downstream 6381 true Chr02: 72438682-72445062 Sorghum bicolor
Sobic.002G363200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72444063-72445062 Sorghum bicolor
Sobic.002G363200 2.0kb upstream 2.0kb upstream 7381 true Chr02: 72436682-72444062 Sorghum bicolor
Sobic.002G363200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72436682-72438681 Sorghum bicolor
Sobic.002G363200 2.0kb downstream 2.0kb downstream 7381 true Chr02: 72438682-72446062 Sorghum bicolor
Sobic.002G363200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72444063-72446062 Sorghum bicolor
Sobic.002G363200 5.0kb upstream 5.0kb upstream 10381 true Chr02: 72433682-72444062 Sorghum bicolor
Sobic.002G363200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72433682-72438681 Sorghum bicolor
Sobic.002G363200 5.0kb downstream 5.0kb downstream 10381 true Chr02: 72438682-72449062 Sorghum bicolor
Sobic.002G363200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72444063-72449062 Sorghum bicolor
Sobic.002G363200 10.0kb upstream 10.0kb upstream 15381 true Chr02: 72428682-72444062 Sorghum bicolor
Sobic.002G363200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72428682-72438681 Sorghum bicolor
Sobic.002G363200 10.0kb downstream 10.0kb downstream 15381 true Chr02: 72438682-72454062 Sorghum bicolor
Sobic.002G363200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72444063-72454062 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196353 5267 Panicoideae View MSA
124581973 5269 Grass View MSA
122043116 5273 Angiosperm View MSA
123428910 5275 Viridiplantae View MSA
121350997 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.485       High
cufflinks 1.234        
cufflinks 1.014       Low
cufflinks 2.131        
cufflinks 1.906        
cufflinks 3.519        
cufflinks 2.187        
cufflinks 1.941        
cufflinks 2.722        
cufflinks 3.059        
cufflinks 1.22       Low
cufflinks 1.977        
cufflinks 2.091        
cufflinks 2.061        
cufflinks 11.063       High
cufflinks 1.673        
cufflinks 2.055        
cufflinks 1.987        
cufflinks 1.56        
cufflinks 1.628        
cufflinks 3.829       High
cufflinks 1.213       Low
cufflinks 1.562        
cufflinks 1.781        
cufflinks 1.258        
cufflinks 1.458        
cufflinks 1.307        
cufflinks 9.771     High High
cufflinks 2.225        
cufflinks 4.955       High

0 Strain