Gene : Sobic.002G362300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13345:SF4 - PROTEIN UXT Genomic Order:  3707
Name:  ? Sobic.002G362300 Secondary Identifier:  ? PAC:37953576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G362300 0.5kb upstream 0.5kb upstream 4871 true Chr02: 72352279-72357149 Sorghum bicolor
Sobic.002G362300 0.5kb upstream 0.5kb upstream 500 false Chr02: 72352279-72352778 Sorghum bicolor
Sobic.002G362300 0.5kb downstream 0.5kb downstream 4871 true Chr02: 72352779-72357649 Sorghum bicolor
Sobic.002G362300 0.5kb downstream 0.5kb downstream 500 false Chr02: 72357150-72357649 Sorghum bicolor
Sobic.002G362300 1.0kb upstream 1.0kb upstream 5371 true Chr02: 72351779-72357149 Sorghum bicolor
Sobic.002G362300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72351779-72352778 Sorghum bicolor
Sobic.002G362300 1.0kb downstream 1.0kb downstream 5371 true Chr02: 72352779-72358149 Sorghum bicolor
Sobic.002G362300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72357150-72358149 Sorghum bicolor
Sobic.002G362300 2.0kb upstream 2.0kb upstream 6371 true Chr02: 72350779-72357149 Sorghum bicolor
Sobic.002G362300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72350779-72352778 Sorghum bicolor
Sobic.002G362300 2.0kb downstream 2.0kb downstream 6371 true Chr02: 72352779-72359149 Sorghum bicolor
Sobic.002G362300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72357150-72359149 Sorghum bicolor
Sobic.002G362300 5.0kb upstream 5.0kb upstream 9371 true Chr02: 72347779-72357149 Sorghum bicolor
Sobic.002G362300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72347779-72352778 Sorghum bicolor
Sobic.002G362300 5.0kb downstream 5.0kb downstream 9371 true Chr02: 72352779-72362149 Sorghum bicolor
Sobic.002G362300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72357150-72362149 Sorghum bicolor
Sobic.002G362300 10.0kb upstream 10.0kb upstream 14371 true Chr02: 72342779-72357149 Sorghum bicolor
Sobic.002G362300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72342779-72352778 Sorghum bicolor
Sobic.002G362300 10.0kb downstream 10.0kb downstream 14371 true Chr02: 72352779-72367149 Sorghum bicolor
Sobic.002G362300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72357150-72367149 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177176 5267 Panicoideae View MSA
124589342 5269 Grass View MSA
122042898 5273 Angiosperm View MSA
121347862 5274 Embryophyte View MSA
123425882 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.975       High
cufflinks 0.112       Low
cufflinks 0.348        
cufflinks 0.838        
cufflinks 0.702        
cufflinks 1.689       High
cufflinks 0.302        
cufflinks 0.208       Low
cufflinks 1.009        
cufflinks 0.764        
cufflinks 0.521        
cufflinks 0.396        
cufflinks 0.546        
cufflinks 0.477        
cufflinks 0.613        
cufflinks 0.362        
cufflinks 0.341        
cufflinks 0.384        
cufflinks 0.353        
cufflinks 0.464        
cufflinks 1.166       High
cufflinks 0.719        
cufflinks 0.378        
cufflinks 0.423        
cufflinks 0.232       Low
cufflinks 0.116       Low
cufflinks 0.608        
cufflinks 5.834       High
cufflinks 0.293        
cufflinks 0.779        

0 Strain