Gene : Sobic.002G361700 S. bicolor v3.1.1
Genomic Order:  3701 Name:  ? Sobic.002G361700
Secondary Identifier:  ? PAC:37953430
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G361700 0.5kb upstream 0.5kb upstream 2455 true Chr02: 72326199-72328653 Sorghum bicolor
Sobic.002G361700 0.5kb upstream 0.5kb upstream 500 false Chr02: 72328154-72328653 Sorghum bicolor
Sobic.002G361700 0.5kb downstream 0.5kb downstream 2455 true Chr02: 72325699-72328153 Sorghum bicolor
Sobic.002G361700 0.5kb downstream 0.5kb downstream 500 false Chr02: 72325699-72326198 Sorghum bicolor
Sobic.002G361700 1.0kb upstream 1.0kb upstream 2955 true Chr02: 72326199-72329153 Sorghum bicolor
Sobic.002G361700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72328154-72329153 Sorghum bicolor
Sobic.002G361700 1.0kb downstream 1.0kb downstream 2955 true Chr02: 72325199-72328153 Sorghum bicolor
Sobic.002G361700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72325199-72326198 Sorghum bicolor
Sobic.002G361700 2.0kb upstream 2.0kb upstream 3955 true Chr02: 72326199-72330153 Sorghum bicolor
Sobic.002G361700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72328154-72330153 Sorghum bicolor
Sobic.002G361700 2.0kb downstream 2.0kb downstream 3955 true Chr02: 72324199-72328153 Sorghum bicolor
Sobic.002G361700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72324199-72326198 Sorghum bicolor
Sobic.002G361700 5.0kb upstream 5.0kb upstream 6955 true Chr02: 72326199-72333153 Sorghum bicolor
Sobic.002G361700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72328154-72333153 Sorghum bicolor
Sobic.002G361700 5.0kb downstream 5.0kb downstream 6955 true Chr02: 72321199-72328153 Sorghum bicolor
Sobic.002G361700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72321199-72326198 Sorghum bicolor
Sobic.002G361700 10.0kb upstream 10.0kb upstream 11955 true Chr02: 72326199-72338153 Sorghum bicolor
Sobic.002G361700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72328154-72338153 Sorghum bicolor
Sobic.002G361700 10.0kb downstream 10.0kb downstream 11955 true Chr02: 72316199-72328153 Sorghum bicolor
Sobic.002G361700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72316199-72326198 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028150 5273 Angiosperm View MSA
122190988 5267 Panicoideae View MSA
124584177 5269 Grass View MSA
121344480 5274 Embryophyte View MSA
123428462 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.294       High
cufflinks 0.04     Low Low
cufflinks 0.455        
cufflinks 0.511        
cufflinks 0.801        
cufflinks 1.21        
cufflinks 0.515        
cufflinks 0.113       Low
cufflinks 1.576       High
cufflinks 1.185        
cufflinks 1.211        
cufflinks 0.85        
cufflinks 1.292        
cufflinks 0.937        
cufflinks 0.604        
cufflinks 0.283        
cufflinks 0.434        
cufflinks 0.565        
cufflinks 0.204       Low
cufflinks 0.416        
cufflinks 0.806        
cufflinks 1.263        
cufflinks 0.8        
cufflinks 0.862        
cufflinks 0.129       Low
cufflinks 0.056       Low
cufflinks 0.634        
cufflinks 0.501        
cufflinks 0.311        
cufflinks 1.014        

0 Strain