Gene : Sobic.002G361400 S. bicolor v3.1.1
Defline:  (1 of 9) PF07899 - Frigida-like protein (Frigida) Genomic Order:  3698
Name:  ? Sobic.002G361400 Secondary Identifier:  ? PAC:37949857
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G361400 0.5kb upstream 0.5kb upstream 5206 true Chr02: 72300819-72306024 Sorghum bicolor
Sobic.002G361400 0.5kb upstream 0.5kb upstream 500 false Chr02: 72305525-72306024 Sorghum bicolor
Sobic.002G361400 0.5kb downstream 0.5kb downstream 5206 true Chr02: 72300319-72305524 Sorghum bicolor
Sobic.002G361400 0.5kb downstream 0.5kb downstream 500 false Chr02: 72300319-72300818 Sorghum bicolor
Sobic.002G361400 1.0kb upstream 1.0kb upstream 5706 true Chr02: 72300819-72306524 Sorghum bicolor
Sobic.002G361400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72305525-72306524 Sorghum bicolor
Sobic.002G361400 1.0kb downstream 1.0kb downstream 5706 true Chr02: 72299819-72305524 Sorghum bicolor
Sobic.002G361400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72299819-72300818 Sorghum bicolor
Sobic.002G361400 2.0kb upstream 2.0kb upstream 6706 true Chr02: 72300819-72307524 Sorghum bicolor
Sobic.002G361400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72305525-72307524 Sorghum bicolor
Sobic.002G361400 2.0kb downstream 2.0kb downstream 6706 true Chr02: 72298819-72305524 Sorghum bicolor
Sobic.002G361400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72298819-72300818 Sorghum bicolor
Sobic.002G361400 5.0kb upstream 5.0kb upstream 9706 true Chr02: 72300819-72310524 Sorghum bicolor
Sobic.002G361400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72305525-72310524 Sorghum bicolor
Sobic.002G361400 5.0kb downstream 5.0kb downstream 9706 true Chr02: 72295819-72305524 Sorghum bicolor
Sobic.002G361400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72295819-72300818 Sorghum bicolor
Sobic.002G361400 10.0kb upstream 10.0kb upstream 14706 true Chr02: 72300819-72315524 Sorghum bicolor
Sobic.002G361400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72305525-72315524 Sorghum bicolor
Sobic.002G361400 10.0kb downstream 10.0kb downstream 14706 true Chr02: 72290819-72305524 Sorghum bicolor
Sobic.002G361400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72290819-72300818 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176026 5267 Panicoideae View MSA
124579706 5269 Grass View MSA
122049415 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.337     High High
cufflinks 3.651       Low
cufflinks 5.363       Low
cufflinks 6.149        
cufflinks 7.956        
cufflinks 6.617        
cufflinks 10.139        
cufflinks 4.092       Low
cufflinks 12.417        
cufflinks 12.383     High  
cufflinks 8.428        
cufflinks 12.611     High  
cufflinks 9.427        
cufflinks 10.257        
cufflinks 6.642        
cufflinks 5.068       Low
cufflinks 10.216        
cufflinks 10.674        
cufflinks 7.938        
cufflinks 11.713        
cufflinks 16.595     High High
cufflinks 9.187        
cufflinks 11.45     High  
cufflinks 12.1     High  
cufflinks 6.203        
cufflinks 3.668       Low
cufflinks 7.377        
cufflinks 14.66     High High
cufflinks 7.863        
cufflinks 9.007        

0 Strain