Gene : Sobic.002G364800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13748:SF31 - COBW DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  3732
Name:  ? Sobic.002G364800 Secondary Identifier:  ? PAC:37950078
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G364800 0.5kb upstream 0.5kb upstream 10234 true Chr02: 72538853-72549086 Sorghum bicolor
Sobic.002G364800 0.5kb upstream 0.5kb upstream 500 false Chr02: 72538853-72539352 Sorghum bicolor
Sobic.002G364800 0.5kb downstream 0.5kb downstream 10234 true Chr02: 72539353-72549586 Sorghum bicolor
Sobic.002G364800 0.5kb downstream 0.5kb downstream 500 false Chr02: 72549087-72549586 Sorghum bicolor
Sobic.002G364800 1.0kb upstream 1.0kb upstream 10734 true Chr02: 72538353-72549086 Sorghum bicolor
Sobic.002G364800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72538353-72539352 Sorghum bicolor
Sobic.002G364800 1.0kb downstream 1.0kb downstream 10734 true Chr02: 72539353-72550086 Sorghum bicolor
Sobic.002G364800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72549087-72550086 Sorghum bicolor
Sobic.002G364800 2.0kb upstream 2.0kb upstream 11734 true Chr02: 72537353-72549086 Sorghum bicolor
Sobic.002G364800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72537353-72539352 Sorghum bicolor
Sobic.002G364800 2.0kb downstream 2.0kb downstream 11734 true Chr02: 72539353-72551086 Sorghum bicolor
Sobic.002G364800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72549087-72551086 Sorghum bicolor
Sobic.002G364800 5.0kb upstream 5.0kb upstream 14734 true Chr02: 72534353-72549086 Sorghum bicolor
Sobic.002G364800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72534353-72539352 Sorghum bicolor
Sobic.002G364800 5.0kb downstream 5.0kb downstream 14734 true Chr02: 72539353-72554086 Sorghum bicolor
Sobic.002G364800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72549087-72554086 Sorghum bicolor
Sobic.002G364800 10.0kb upstream 10.0kb upstream 19734 true Chr02: 72529353-72549086 Sorghum bicolor
Sobic.002G364800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72529353-72539352 Sorghum bicolor
Sobic.002G364800 10.0kb downstream 10.0kb downstream 19734 true Chr02: 72539353-72559086 Sorghum bicolor
Sobic.002G364800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72549087-72559086 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188705 5267 Panicoideae View MSA
124570550 5269 Grass View MSA
122044727 5273 Angiosperm View MSA
121345063 5274 Embryophyte View MSA
123428327 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.316        
cufflinks 1.308       Low
cufflinks 3.42        
cufflinks 5.265       High
cufflinks 2.631        
cufflinks 5.054       High
cufflinks 1.53       Low
cufflinks 1.621        
cufflinks 5.193       High
cufflinks 4.537       High
cufflinks 1.835        
cufflinks 2.322        
cufflinks 3.469        
cufflinks 1.822        
cufflinks 3.011        
cufflinks 2.801        
cufflinks 1.452       Low
cufflinks 1.563       Low
cufflinks 2.296        
cufflinks 2.247        
cufflinks 5.33       High
cufflinks 2.146        
cufflinks 1.693        
cufflinks 1.755        
cufflinks 2.063        
cufflinks 1.365       Low
cufflinks 2.898        
cufflinks 2.951        
cufflinks 1.549       Low
cufflinks 2.653        

0 Strain