Gene : Sobic.006G233600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33109:SF6 - EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED Genomic Order:  2437
Name:  ? Sobic.006G233600 Secondary Identifier:  ? PAC:37946315
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G233600 0.5kb upstream 0.5kb upstream 2478 true Chr06: 57551374-57553851 Sorghum bicolor
Sobic.006G233600 0.5kb upstream 0.5kb upstream 500 false Chr06: 57551374-57551873 Sorghum bicolor
Sobic.006G233600 0.5kb downstream 0.5kb downstream 2478 true Chr06: 57551874-57554351 Sorghum bicolor
Sobic.006G233600 0.5kb downstream 0.5kb downstream 500 false Chr06: 57553852-57554351 Sorghum bicolor
Sobic.006G233600 1.0kb upstream 1.0kb upstream 2978 true Chr06: 57550874-57553851 Sorghum bicolor
Sobic.006G233600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57550874-57551873 Sorghum bicolor
Sobic.006G233600 1.0kb downstream 1.0kb downstream 2978 true Chr06: 57551874-57554851 Sorghum bicolor
Sobic.006G233600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57553852-57554851 Sorghum bicolor
Sobic.006G233600 2.0kb upstream 2.0kb upstream 3978 true Chr06: 57549874-57553851 Sorghum bicolor
Sobic.006G233600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57549874-57551873 Sorghum bicolor
Sobic.006G233600 2.0kb downstream 2.0kb downstream 3978 true Chr06: 57551874-57555851 Sorghum bicolor
Sobic.006G233600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57553852-57555851 Sorghum bicolor
Sobic.006G233600 5.0kb upstream 5.0kb upstream 6978 true Chr06: 57546874-57553851 Sorghum bicolor
Sobic.006G233600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57546874-57551873 Sorghum bicolor
Sobic.006G233600 5.0kb downstream 5.0kb downstream 6978 true Chr06: 57551874-57558851 Sorghum bicolor
Sobic.006G233600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57553852-57558851 Sorghum bicolor
Sobic.006G233600 10.0kb upstream 10.0kb upstream 11978 true Chr06: 57541874-57553851 Sorghum bicolor
Sobic.006G233600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57541874-57551873 Sorghum bicolor
Sobic.006G233600 10.0kb downstream 10.0kb downstream 11978 true Chr06: 57551874-57563851 Sorghum bicolor
Sobic.006G233600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57553852-57563851 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122174681 5267 Panicoideae View MSA
124585802 5269 Grass View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.694       High
cufflinks 0.049        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 0.009     Low Low
cufflinks 1.181       High
cufflinks 0.103        
cufflinks 0.018     Low  
cufflinks 0.099        
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.382       High
cufflinks 1.019       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.671       High
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.108        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112        
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain