Gene : Sobic.002G358600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF64 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  3671
Name:  ? Sobic.002G358600 Secondary Identifier:  ? PAC:37951577
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7511 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G358600 0.5kb upstream 0.5kb upstream 3227 true Chr02: 72095541-72098767 Sorghum bicolor
Sobic.002G358600 0.5kb upstream 0.5kb upstream 500 false Chr02: 72095541-72096040 Sorghum bicolor
Sobic.002G358600 0.5kb downstream 0.5kb downstream 3227 true Chr02: 72096041-72099267 Sorghum bicolor
Sobic.002G358600 0.5kb downstream 0.5kb downstream 500 false Chr02: 72098768-72099267 Sorghum bicolor
Sobic.002G358600 1.0kb upstream 1.0kb upstream 3727 true Chr02: 72095041-72098767 Sorghum bicolor
Sobic.002G358600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 72095041-72096040 Sorghum bicolor
Sobic.002G358600 1.0kb downstream 1.0kb downstream 3727 true Chr02: 72096041-72099767 Sorghum bicolor
Sobic.002G358600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 72098768-72099767 Sorghum bicolor
Sobic.002G358600 2.0kb upstream 2.0kb upstream 4727 true Chr02: 72094041-72098767 Sorghum bicolor
Sobic.002G358600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 72094041-72096040 Sorghum bicolor
Sobic.002G358600 2.0kb downstream 2.0kb downstream 4727 true Chr02: 72096041-72100767 Sorghum bicolor
Sobic.002G358600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 72098768-72100767 Sorghum bicolor
Sobic.002G358600 5.0kb upstream 5.0kb upstream 7727 true Chr02: 72091041-72098767 Sorghum bicolor
Sobic.002G358600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 72091041-72096040 Sorghum bicolor
Sobic.002G358600 5.0kb downstream 5.0kb downstream 7727 true Chr02: 72096041-72103767 Sorghum bicolor
Sobic.002G358600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 72098768-72103767 Sorghum bicolor
Sobic.002G358600 10.0kb upstream 10.0kb upstream 12727 true Chr02: 72086041-72098767 Sorghum bicolor
Sobic.002G358600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 72086041-72096040 Sorghum bicolor
Sobic.002G358600 10.0kb downstream 10.0kb downstream 12727 true Chr02: 72096041-72108767 Sorghum bicolor
Sobic.002G358600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 72098768-72108767 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180138 5267 Panicoideae View MSA
124587753 5269 Grass View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.762       Low
cufflinks 4.299        
cufflinks 10.232     High High
cufflinks 13.916     High High
cufflinks 4.354        
cufflinks 10.09       High
cufflinks 3.43        
cufflinks 5.934        
cufflinks 6.871        
cufflinks 4.875        
cufflinks 7.834        
cufflinks 1.937       Low
cufflinks 5.721        
cufflinks 2.39        
cufflinks 8.942       High
cufflinks 2.765        
cufflinks 1.961        
cufflinks 1.412       Low
cufflinks 7.075        
cufflinks 1.766       Low
cufflinks 1.343       Low
cufflinks 3.86        
cufflinks 1.998        
cufflinks 2.086        
cufflinks 5.36        
cufflinks 4.483        
cufflinks 4.265        
cufflinks 2.733        
cufflinks 1.894       Low
cufflinks 8.909       High

0 Strain