Gene : Sobic.006G160900 S. bicolor v3.1.1
Defline:  (1 of 130) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1681
Name:  ? Sobic.006G160900 Secondary Identifier:  ? PAC:37948138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G160900 0.5kb upstream 0.5kb upstream 7249 true Chr06: 51876066-51883314 Sorghum bicolor
Sobic.006G160900 0.5kb upstream 0.5kb upstream 500 false Chr06: 51882815-51883314 Sorghum bicolor
Sobic.006G160900 0.5kb downstream 0.5kb downstream 7249 true Chr06: 51875566-51882814 Sorghum bicolor
Sobic.006G160900 0.5kb downstream 0.5kb downstream 500 false Chr06: 51875566-51876065 Sorghum bicolor
Sobic.006G160900 1.0kb upstream 1.0kb upstream 7749 true Chr06: 51876066-51883814 Sorghum bicolor
Sobic.006G160900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51882815-51883814 Sorghum bicolor
Sobic.006G160900 1.0kb downstream 1.0kb downstream 7749 true Chr06: 51875066-51882814 Sorghum bicolor
Sobic.006G160900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51875066-51876065 Sorghum bicolor
Sobic.006G160900 2.0kb upstream 2.0kb upstream 8749 true Chr06: 51876066-51884814 Sorghum bicolor
Sobic.006G160900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51882815-51884814 Sorghum bicolor
Sobic.006G160900 2.0kb downstream 2.0kb downstream 8749 true Chr06: 51874066-51882814 Sorghum bicolor
Sobic.006G160900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51874066-51876065 Sorghum bicolor
Sobic.006G160900 5.0kb upstream 5.0kb upstream 11749 true Chr06: 51876066-51887814 Sorghum bicolor
Sobic.006G160900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51882815-51887814 Sorghum bicolor
Sobic.006G160900 5.0kb downstream 5.0kb downstream 11749 true Chr06: 51871066-51882814 Sorghum bicolor
Sobic.006G160900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51871066-51876065 Sorghum bicolor
Sobic.006G160900 10.0kb upstream 10.0kb upstream 16749 true Chr06: 51876066-51892814 Sorghum bicolor
Sobic.006G160900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51882815-51892814 Sorghum bicolor
Sobic.006G160900 10.0kb downstream 10.0kb downstream 16749 true Chr06: 51866066-51882814 Sorghum bicolor
Sobic.006G160900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51866066-51876065 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045953 5273 Angiosperm View MSA
122189137 5267 Panicoideae View MSA
124586215 5269 Grass View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.229        
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.229        
cufflinks 0.001     Low Low
cufflinks 0.006     Low Low
cufflinks 0.723       High
cufflinks 0.25        
cufflinks 0.071     Low  
cufflinks 0.431        
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189        
cufflinks 0.216        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.191        
cufflinks 0.053     Low  
cufflinks 0.474        
cufflinks 0.255        
cufflinks 0.264        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.906       High
cufflinks 0.002     Low Low
cufflinks 1.0       High
cufflinks 0.002     Low Low

0 Strain