Gene : Sobic.006G162200 S. bicolor v3.1.1
Defline:  (1 of 1) PF10664 - Cyanobacterial and plastid NDH-1 subunit M (NdhM) Genomic Order:  1693
Name:  ? Sobic.006G162200 Secondary Identifier:  ? PAC:37948315
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G162200 0.5kb upstream 0.5kb upstream 1907 true Chr06: 51990834-51992740 Sorghum bicolor
Sobic.006G162200 0.5kb upstream 0.5kb upstream 500 false Chr06: 51990834-51991333 Sorghum bicolor
Sobic.006G162200 0.5kb downstream 0.5kb downstream 1907 true Chr06: 51991334-51993240 Sorghum bicolor
Sobic.006G162200 0.5kb downstream 0.5kb downstream 500 false Chr06: 51992741-51993240 Sorghum bicolor
Sobic.006G162200 1.0kb upstream 1.0kb upstream 2407 true Chr06: 51990334-51992740 Sorghum bicolor
Sobic.006G162200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51990334-51991333 Sorghum bicolor
Sobic.006G162200 1.0kb downstream 1.0kb downstream 2407 true Chr06: 51991334-51993740 Sorghum bicolor
Sobic.006G162200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51992741-51993740 Sorghum bicolor
Sobic.006G162200 2.0kb upstream 2.0kb upstream 3407 true Chr06: 51989334-51992740 Sorghum bicolor
Sobic.006G162200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51989334-51991333 Sorghum bicolor
Sobic.006G162200 2.0kb downstream 2.0kb downstream 3407 true Chr06: 51991334-51994740 Sorghum bicolor
Sobic.006G162200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51992741-51994740 Sorghum bicolor
Sobic.006G162200 5.0kb upstream 5.0kb upstream 6407 true Chr06: 51986334-51992740 Sorghum bicolor
Sobic.006G162200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51986334-51991333 Sorghum bicolor
Sobic.006G162200 5.0kb downstream 5.0kb downstream 6407 true Chr06: 51991334-51997740 Sorghum bicolor
Sobic.006G162200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51992741-51997740 Sorghum bicolor
Sobic.006G162200 10.0kb upstream 10.0kb upstream 11407 true Chr06: 51981334-51992740 Sorghum bicolor
Sobic.006G162200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51981334-51991333 Sorghum bicolor
Sobic.006G162200 10.0kb downstream 10.0kb downstream 11407 true Chr06: 51991334-52002740 Sorghum bicolor
Sobic.006G162200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51992741-52002740 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182511 5267 Panicoideae View MSA
124584080 5269 Grass View MSA
122048776 5273 Angiosperm View MSA
121347175 5274 Embryophyte View MSA
123380502 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.7        
cufflinks 88.558     High High
cufflinks 30.351     High High
cufflinks 14.397     High  
cufflinks 0.17        
cufflinks 10.354        
cufflinks 37.453     High High
cufflinks 52.021     High High
cufflinks 0.304        
cufflinks 0.242        
cufflinks 0.146        
cufflinks 0.046     Low Low
cufflinks 0.373        
cufflinks 0.076     Low  
cufflinks 5.168        
cufflinks 63.642     High High
cufflinks 37.03     High High
cufflinks 45.122     High High
cufflinks 31.231     High High
cufflinks 17.006     High  
cufflinks 0.118        
cufflinks 0.041     Low Low
cufflinks 0.029     Low Low
cufflinks 0.067     Low Low
cufflinks 42.955     High High
cufflinks 86.569     High High
cufflinks 0.161        
cufflinks 0.189        
cufflinks 23.736     High High
cufflinks 2.666        

0 Strain