Gene : Sobic.006G163000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10663//PTHR10663:SF163 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1702
Name:  ? Sobic.006G163000 Secondary Identifier:  ? PAC:37945745
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G163000 0.5kb upstream 0.5kb upstream 4803 true Chr06: 52056253-52061055 Sorghum bicolor
Sobic.006G163000 0.5kb upstream 0.5kb upstream 500 false Chr06: 52060556-52061055 Sorghum bicolor
Sobic.006G163000 0.5kb downstream 0.5kb downstream 4803 true Chr06: 52055753-52060555 Sorghum bicolor
Sobic.006G163000 0.5kb downstream 0.5kb downstream 500 false Chr06: 52055753-52056252 Sorghum bicolor
Sobic.006G163000 1.0kb upstream 1.0kb upstream 5303 true Chr06: 52056253-52061555 Sorghum bicolor
Sobic.006G163000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52060556-52061555 Sorghum bicolor
Sobic.006G163000 1.0kb downstream 1.0kb downstream 5303 true Chr06: 52055253-52060555 Sorghum bicolor
Sobic.006G163000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52055253-52056252 Sorghum bicolor
Sobic.006G163000 2.0kb upstream 2.0kb upstream 6303 true Chr06: 52056253-52062555 Sorghum bicolor
Sobic.006G163000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52060556-52062555 Sorghum bicolor
Sobic.006G163000 2.0kb downstream 2.0kb downstream 6303 true Chr06: 52054253-52060555 Sorghum bicolor
Sobic.006G163000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52054253-52056252 Sorghum bicolor
Sobic.006G163000 5.0kb upstream 5.0kb upstream 9303 true Chr06: 52056253-52065555 Sorghum bicolor
Sobic.006G163000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52060556-52065555 Sorghum bicolor
Sobic.006G163000 5.0kb downstream 5.0kb downstream 9303 true Chr06: 52051253-52060555 Sorghum bicolor
Sobic.006G163000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52051253-52056252 Sorghum bicolor
Sobic.006G163000 10.0kb upstream 10.0kb upstream 14303 true Chr06: 52056253-52070555 Sorghum bicolor
Sobic.006G163000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52060556-52070555 Sorghum bicolor
Sobic.006G163000 10.0kb downstream 10.0kb downstream 14303 true Chr06: 52046253-52060555 Sorghum bicolor
Sobic.006G163000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52046253-52056252 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183294 5267 Panicoideae View MSA
124577045 5269 Grass View MSA
122046082 5273 Angiosperm View MSA
121348506 5274 Embryophyte View MSA
123380886 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.306        
cufflinks 6.164        
cufflinks 27.019     High High
cufflinks 23.851     High High
cufflinks 12.004        
cufflinks 8.609        
cufflinks 4.825       Low
cufflinks 9.577     High  
cufflinks 10.078        
cufflinks 9.131        
cufflinks 10.049        
cufflinks 8.41        
cufflinks 10.928        
cufflinks 8.462        
cufflinks 10.517        
cufflinks 11.539     High  
cufflinks 5.084       Low
cufflinks 4.773       Low
cufflinks 26.515     High High
cufflinks 9.57        
cufflinks 2.174       Low
cufflinks 7.556        
cufflinks 7.912        
cufflinks 7.282        
cufflinks 12.746     High  
cufflinks 7.384     High  
cufflinks 18.099     High High
cufflinks 2.596       Low
cufflinks 7.75        
cufflinks 7.876        

0 Strain