Gene : Sobic.006G162600 S. bicolor v3.1.1
Genomic Order:  1698 Name:  ? Sobic.006G162600
Secondary Identifier:  ? PAC:37946984
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G162600 0.5kb upstream 0.5kb upstream 2735 true Chr06: 52018691-52021425 Sorghum bicolor
Sobic.006G162600 0.5kb upstream 0.5kb upstream 500 false Chr06: 52020926-52021425 Sorghum bicolor
Sobic.006G162600 0.5kb downstream 0.5kb downstream 2735 true Chr06: 52018191-52020925 Sorghum bicolor
Sobic.006G162600 0.5kb downstream 0.5kb downstream 500 false Chr06: 52018191-52018690 Sorghum bicolor
Sobic.006G162600 1.0kb upstream 1.0kb upstream 3235 true Chr06: 52018691-52021925 Sorghum bicolor
Sobic.006G162600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52020926-52021925 Sorghum bicolor
Sobic.006G162600 1.0kb downstream 1.0kb downstream 3235 true Chr06: 52017691-52020925 Sorghum bicolor
Sobic.006G162600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52017691-52018690 Sorghum bicolor
Sobic.006G162600 2.0kb upstream 2.0kb upstream 4235 true Chr06: 52018691-52022925 Sorghum bicolor
Sobic.006G162600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52020926-52022925 Sorghum bicolor
Sobic.006G162600 2.0kb downstream 2.0kb downstream 4235 true Chr06: 52016691-52020925 Sorghum bicolor
Sobic.006G162600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52016691-52018690 Sorghum bicolor
Sobic.006G162600 5.0kb upstream 5.0kb upstream 7235 true Chr06: 52018691-52025925 Sorghum bicolor
Sobic.006G162600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52020926-52025925 Sorghum bicolor
Sobic.006G162600 5.0kb downstream 5.0kb downstream 7235 true Chr06: 52013691-52020925 Sorghum bicolor
Sobic.006G162600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52013691-52018690 Sorghum bicolor
Sobic.006G162600 10.0kb upstream 10.0kb upstream 12235 true Chr06: 52018691-52030925 Sorghum bicolor
Sobic.006G162600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52020926-52030925 Sorghum bicolor
Sobic.006G162600 10.0kb downstream 10.0kb downstream 12235 true Chr06: 52008691-52020925 Sorghum bicolor
Sobic.006G162600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52008691-52018690 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184363 5267 Panicoideae View MSA
124578673 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22       High
cufflinks 0.224       Low
cufflinks 0.603        
cufflinks 0.504        
cufflinks 1.793       High
cufflinks 1.145        
cufflinks 0.93        
cufflinks 0.613        
cufflinks 1.712       High
cufflinks 1.577       High
cufflinks 0.512        
cufflinks 0.552        
cufflinks 1.123        
cufflinks 0.731        
cufflinks 2.378       High
cufflinks 0.721        
cufflinks 1.034        
cufflinks 0.793        
cufflinks 0.354       Low
cufflinks 1.079        
cufflinks 1.63       High
cufflinks 0.849        
cufflinks 0.512        
cufflinks 0.444       Low
cufflinks 0.325       Low
cufflinks 0.334       Low
cufflinks 0.274       Low
cufflinks 2.652       High
cufflinks 0.749        
cufflinks 2.304       High

0 Strain