Gene : Sobic.006G162400 S. bicolor v3.1.1
Defline:  similar to OSJNBa0011L07.4 protein Genomic Order:  1695
Name:  ? Sobic.006G162400 Secondary Identifier:  ? PAC:37948756
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G162400 0.5kb upstream 0.5kb upstream 3608 true Chr06: 52005898-52009505 Sorghum bicolor
Sobic.006G162400 0.5kb upstream 0.5kb upstream 500 false Chr06: 52009006-52009505 Sorghum bicolor
Sobic.006G162400 0.5kb downstream 0.5kb downstream 3608 true Chr06: 52005398-52009005 Sorghum bicolor
Sobic.006G162400 0.5kb downstream 0.5kb downstream 500 false Chr06: 52005398-52005897 Sorghum bicolor
Sobic.006G162400 1.0kb upstream 1.0kb upstream 4108 true Chr06: 52005898-52010005 Sorghum bicolor
Sobic.006G162400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52009006-52010005 Sorghum bicolor
Sobic.006G162400 1.0kb downstream 1.0kb downstream 4108 true Chr06: 52004898-52009005 Sorghum bicolor
Sobic.006G162400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52004898-52005897 Sorghum bicolor
Sobic.006G162400 2.0kb upstream 2.0kb upstream 5108 true Chr06: 52005898-52011005 Sorghum bicolor
Sobic.006G162400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52009006-52011005 Sorghum bicolor
Sobic.006G162400 2.0kb downstream 2.0kb downstream 5108 true Chr06: 52003898-52009005 Sorghum bicolor
Sobic.006G162400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52003898-52005897 Sorghum bicolor
Sobic.006G162400 5.0kb upstream 5.0kb upstream 8108 true Chr06: 52005898-52014005 Sorghum bicolor
Sobic.006G162400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52009006-52014005 Sorghum bicolor
Sobic.006G162400 5.0kb downstream 5.0kb downstream 8108 true Chr06: 52000898-52009005 Sorghum bicolor
Sobic.006G162400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52000898-52005897 Sorghum bicolor
Sobic.006G162400 10.0kb upstream 10.0kb upstream 13108 true Chr06: 52005898-52019005 Sorghum bicolor
Sobic.006G162400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52009006-52019005 Sorghum bicolor
Sobic.006G162400 10.0kb downstream 10.0kb downstream 13108 true Chr06: 51995898-52009005 Sorghum bicolor
Sobic.006G162400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51995898-52005897 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184363 5267 Panicoideae View MSA
124578673 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.672       High
cufflinks 1.965       Low
cufflinks 1.976       Low
cufflinks 3.4        
cufflinks 3.986        
cufflinks 3.471        
cufflinks 2.856        
cufflinks 2.461        
cufflinks 3.341        
cufflinks 3.156        
cufflinks 4.013        
cufflinks 3.213        
cufflinks 1.862       Low
cufflinks 4.67       High
cufflinks 3.462        
cufflinks 2.108       Low
cufflinks 3.252        
cufflinks 3.424        
cufflinks 1.386       Low
cufflinks 2.64        
cufflinks 5.685       High
cufflinks 3.971        
cufflinks 3.241        
cufflinks 3.432        
cufflinks 2.315        
cufflinks 2.998        
cufflinks 3.443        
cufflinks 5.743       High
cufflinks 2.349        
cufflinks 3.74        

0 Strain