Gene : Sobic.006G171400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15615:SF15 - CYCLIN-U2-1-RELATED Genomic Order:  1793
Name:  ? Sobic.006G171400 Secondary Identifier:  ? PAC:37946089
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G171400 0.5kb upstream 0.5kb upstream 3621 true Chr06: 52776058-52779678 Sorghum bicolor
Sobic.006G171400 0.5kb upstream 0.5kb upstream 500 false Chr06: 52776058-52776557 Sorghum bicolor
Sobic.006G171400 0.5kb downstream 0.5kb downstream 3621 true Chr06: 52776558-52780178 Sorghum bicolor
Sobic.006G171400 0.5kb downstream 0.5kb downstream 500 false Chr06: 52779679-52780178 Sorghum bicolor
Sobic.006G171400 1.0kb upstream 1.0kb upstream 4121 true Chr06: 52775558-52779678 Sorghum bicolor
Sobic.006G171400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52775558-52776557 Sorghum bicolor
Sobic.006G171400 1.0kb downstream 1.0kb downstream 4121 true Chr06: 52776558-52780678 Sorghum bicolor
Sobic.006G171400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52779679-52780678 Sorghum bicolor
Sobic.006G171400 2.0kb upstream 2.0kb upstream 5121 true Chr06: 52774558-52779678 Sorghum bicolor
Sobic.006G171400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52774558-52776557 Sorghum bicolor
Sobic.006G171400 2.0kb downstream 2.0kb downstream 5121 true Chr06: 52776558-52781678 Sorghum bicolor
Sobic.006G171400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52779679-52781678 Sorghum bicolor
Sobic.006G171400 5.0kb upstream 5.0kb upstream 8121 true Chr06: 52771558-52779678 Sorghum bicolor
Sobic.006G171400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52771558-52776557 Sorghum bicolor
Sobic.006G171400 5.0kb downstream 5.0kb downstream 8121 true Chr06: 52776558-52784678 Sorghum bicolor
Sobic.006G171400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52779679-52784678 Sorghum bicolor
Sobic.006G171400 10.0kb upstream 10.0kb upstream 13121 true Chr06: 52766558-52779678 Sorghum bicolor
Sobic.006G171400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52766558-52776557 Sorghum bicolor
Sobic.006G171400 10.0kb downstream 10.0kb downstream 13121 true Chr06: 52776558-52789678 Sorghum bicolor
Sobic.006G171400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52779679-52789678 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041371 5273 Angiosperm View MSA
122188287 5267 Panicoideae View MSA
124573078 5269 Grass View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.71        
cufflinks 0.02     Low Low
cufflinks 0.005     Low Low
cufflinks 0.01     Low Low
cufflinks 1.54        
cufflinks 0.153        
cufflinks 0.543        
cufflinks 0.604        
cufflinks 0.39        
cufflinks 0.226        
cufflinks 0.716        
cufflinks 0.519        
cufflinks 1.034        
cufflinks 1.261        
cufflinks 0.497        
cufflinks 0.037     Low Low
cufflinks 0.818        
cufflinks 0.606        
cufflinks 0.172        
cufflinks 0.736        
cufflinks 0.838        
cufflinks 1.833        
cufflinks 0.721        
cufflinks 0.665        
cufflinks 0.02     Low Low
cufflinks 0.042       Low
cufflinks 0.314        
cufflinks 1.091        
cufflinks 1.325        
cufflinks 0.854        

0 Strain