Gene : Sobic.006G170600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF134 - AQUAPORIN TRANSPORTER // AQUAPORIN TIP2-3-RELATED Genomic Order:  1784
Name:  ? Sobic.006G170600 Secondary Identifier:  ? PAC:37947220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G170600 0.5kb upstream 0.5kb upstream 1689 true Chr06: 52722392-52724080 Sorghum bicolor
Sobic.006G170600 0.5kb upstream 0.5kb upstream 500 false Chr06: 52723581-52724080 Sorghum bicolor
Sobic.006G170600 0.5kb downstream 0.5kb downstream 1689 true Chr06: 52721892-52723580 Sorghum bicolor
Sobic.006G170600 0.5kb downstream 0.5kb downstream 500 false Chr06: 52721892-52722391 Sorghum bicolor
Sobic.006G170600 1.0kb upstream 1.0kb upstream 2189 true Chr06: 52722392-52724580 Sorghum bicolor
Sobic.006G170600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52723581-52724580 Sorghum bicolor
Sobic.006G170600 1.0kb downstream 1.0kb downstream 2189 true Chr06: 52721392-52723580 Sorghum bicolor
Sobic.006G170600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52721392-52722391 Sorghum bicolor
Sobic.006G170600 2.0kb upstream 2.0kb upstream 3189 true Chr06: 52722392-52725580 Sorghum bicolor
Sobic.006G170600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52723581-52725580 Sorghum bicolor
Sobic.006G170600 2.0kb downstream 2.0kb downstream 3189 true Chr06: 52720392-52723580 Sorghum bicolor
Sobic.006G170600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52720392-52722391 Sorghum bicolor
Sobic.006G170600 5.0kb upstream 5.0kb upstream 6189 true Chr06: 52722392-52728580 Sorghum bicolor
Sobic.006G170600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52723581-52728580 Sorghum bicolor
Sobic.006G170600 5.0kb downstream 5.0kb downstream 6189 true Chr06: 52717392-52723580 Sorghum bicolor
Sobic.006G170600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52717392-52722391 Sorghum bicolor
Sobic.006G170600 10.0kb upstream 10.0kb upstream 11189 true Chr06: 52722392-52733580 Sorghum bicolor
Sobic.006G170600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52723581-52733580 Sorghum bicolor
Sobic.006G170600 10.0kb downstream 10.0kb downstream 11189 true Chr06: 52712392-52723580 Sorghum bicolor
Sobic.006G170600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52712392-52722391 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180815 5267 Panicoideae View MSA
124584121 5269 Grass View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.997        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low Low
cufflinks 0.011     Low Low
cufflinks 0.07     Low  
cufflinks 1.395        
cufflinks 0.169        
cufflinks 0.089        
cufflinks 0.276        
cufflinks 505.154     High High
cufflinks 148.166     High High
cufflinks 0.116        
cufflinks 318.191     High High
cufflinks 0.063     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.757        
cufflinks 0.607        
cufflinks 0.022     Low Low
cufflinks 0.661        
cufflinks 0.25        
cufflinks 381.567     High High
cufflinks 259.1     High High
cufflinks 272.615     High High
cufflinks 0.193        
cufflinks 0.036     Low Low
cufflinks 82.062     High High
cufflinks 1.045        
cufflinks 0.081     Low  
cufflinks 0.039     Low Low

0 Strain