Gene : Sobic.006G173100 S. bicolor v3.1.1
Defline:  (1 of 2) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31) Genomic Order:  1812
Name:  ? Sobic.006G173100 Secondary Identifier:  ? PAC:37947165
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G173100 0.5kb upstream 0.5kb upstream 7041 true Chr06: 52904482-52911522 Sorghum bicolor
Sobic.006G173100 0.5kb upstream 0.5kb upstream 500 false Chr06: 52904482-52904981 Sorghum bicolor
Sobic.006G173100 0.5kb downstream 0.5kb downstream 7041 true Chr06: 52904982-52912022 Sorghum bicolor
Sobic.006G173100 0.5kb downstream 0.5kb downstream 500 false Chr06: 52911523-52912022 Sorghum bicolor
Sobic.006G173100 1.0kb upstream 1.0kb upstream 7541 true Chr06: 52903982-52911522 Sorghum bicolor
Sobic.006G173100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52903982-52904981 Sorghum bicolor
Sobic.006G173100 1.0kb downstream 1.0kb downstream 7541 true Chr06: 52904982-52912522 Sorghum bicolor
Sobic.006G173100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52911523-52912522 Sorghum bicolor
Sobic.006G173100 2.0kb upstream 2.0kb upstream 8541 true Chr06: 52902982-52911522 Sorghum bicolor
Sobic.006G173100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52902982-52904981 Sorghum bicolor
Sobic.006G173100 2.0kb downstream 2.0kb downstream 8541 true Chr06: 52904982-52913522 Sorghum bicolor
Sobic.006G173100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52911523-52913522 Sorghum bicolor
Sobic.006G173100 5.0kb upstream 5.0kb upstream 11541 true Chr06: 52899982-52911522 Sorghum bicolor
Sobic.006G173100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52899982-52904981 Sorghum bicolor
Sobic.006G173100 5.0kb downstream 5.0kb downstream 11541 true Chr06: 52904982-52916522 Sorghum bicolor
Sobic.006G173100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52911523-52916522 Sorghum bicolor
Sobic.006G173100 10.0kb upstream 10.0kb upstream 16541 true Chr06: 52894982-52911522 Sorghum bicolor
Sobic.006G173100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52894982-52904981 Sorghum bicolor
Sobic.006G173100 10.0kb downstream 10.0kb downstream 16541 true Chr06: 52904982-52921522 Sorghum bicolor
Sobic.006G173100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52911523-52921522 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177206 5267 Panicoideae View MSA
124574565 5269 Grass View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.273        
cufflinks 4.603       Low
cufflinks 8.745        
cufflinks 10.075        
cufflinks 11.24        
cufflinks 10.432        
cufflinks 7.064        
cufflinks 3.903       Low
cufflinks 12.12       High
cufflinks 11.827     High High
cufflinks 7.461        
cufflinks 8.271        
cufflinks 10.314        
cufflinks 7.263        
cufflinks 9.634        
cufflinks 6.682        
cufflinks 6.912        
cufflinks 7.645        
cufflinks 9.23        
cufflinks 8.469        
cufflinks 12.716       High
cufflinks 7.714        
cufflinks 7.901        
cufflinks 7.805        
cufflinks 6.635        
cufflinks 4.096       Low
cufflinks 8.474        
cufflinks 21.237     High High
cufflinks 4.812       Low
cufflinks 10.348        

0 Strain