Gene : Sobic.006G177300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10030//PTHR10030:SF27 - ALPHA-L-FUCOSIDASE // ALPHA-L-FUCOSIDASE 1 Genomic Order:  1852
Name:  ? Sobic.006G177300 Secondary Identifier:  ? PAC:37948230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G177300 0.5kb upstream 0.5kb upstream 3675 true Chr06: 53224680-53228354 Sorghum bicolor
Sobic.006G177300 0.5kb upstream 0.5kb upstream 500 false Chr06: 53227855-53228354 Sorghum bicolor
Sobic.006G177300 0.5kb downstream 0.5kb downstream 3675 true Chr06: 53224180-53227854 Sorghum bicolor
Sobic.006G177300 0.5kb downstream 0.5kb downstream 500 false Chr06: 53224180-53224679 Sorghum bicolor
Sobic.006G177300 1.0kb upstream 1.0kb upstream 4175 true Chr06: 53224680-53228854 Sorghum bicolor
Sobic.006G177300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53227855-53228854 Sorghum bicolor
Sobic.006G177300 1.0kb downstream 1.0kb downstream 4175 true Chr06: 53223680-53227854 Sorghum bicolor
Sobic.006G177300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53223680-53224679 Sorghum bicolor
Sobic.006G177300 2.0kb upstream 2.0kb upstream 5175 true Chr06: 53224680-53229854 Sorghum bicolor
Sobic.006G177300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53227855-53229854 Sorghum bicolor
Sobic.006G177300 2.0kb downstream 2.0kb downstream 5175 true Chr06: 53222680-53227854 Sorghum bicolor
Sobic.006G177300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53222680-53224679 Sorghum bicolor
Sobic.006G177300 5.0kb upstream 5.0kb upstream 8175 true Chr06: 53224680-53232854 Sorghum bicolor
Sobic.006G177300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53227855-53232854 Sorghum bicolor
Sobic.006G177300 5.0kb downstream 5.0kb downstream 8175 true Chr06: 53219680-53227854 Sorghum bicolor
Sobic.006G177300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53219680-53224679 Sorghum bicolor
Sobic.006G177300 10.0kb upstream 10.0kb upstream 13175 true Chr06: 53224680-53237854 Sorghum bicolor
Sobic.006G177300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53227855-53237854 Sorghum bicolor
Sobic.006G177300 10.0kb downstream 10.0kb downstream 13175 true Chr06: 53214680-53227854 Sorghum bicolor
Sobic.006G177300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53214680-53224679 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195152 5267 Panicoideae View MSA
124571880 5269 Grass View MSA
122047264 5273 Angiosperm View MSA
121351387 5274 Embryophyte View MSA
123382147 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.149        
cufflinks 0.714       Low
cufflinks 2.086       Low
cufflinks 3.348        
cufflinks 3.476        
cufflinks 2.455        
cufflinks 3.699        
cufflinks 2.423        
cufflinks 8.566       High
cufflinks 7.356       High
cufflinks 6.426        
cufflinks 9.982       High
cufflinks 5.207        
cufflinks 8.234       High
cufflinks 3.115        
cufflinks 1.822       Low
cufflinks 3.661        
cufflinks 3.641        
cufflinks 3.778        
cufflinks 5.499        
cufflinks 6.59        
cufflinks 4.34        
cufflinks 7.062       High
cufflinks 7.562       High
cufflinks 2.005       Low
cufflinks 0.864       Low
cufflinks 5.605        
cufflinks 1.896       Low
cufflinks 2.341        
cufflinks 4.174        

0 Strain