Gene : Sobic.006G176400 S. bicolor v3.1.1
Defline:  (1 of 11) PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Genomic Order:  1843
Name:  ? Sobic.006G176400 Secondary Identifier:  ? PAC:37947665
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G176400 0.5kb upstream 0.5kb upstream 3246 true Chr06: 53167115-53170360 Sorghum bicolor
Sobic.006G176400 0.5kb upstream 0.5kb upstream 500 false Chr06: 53167115-53167614 Sorghum bicolor
Sobic.006G176400 0.5kb downstream 0.5kb downstream 3246 true Chr06: 53167615-53170860 Sorghum bicolor
Sobic.006G176400 0.5kb downstream 0.5kb downstream 500 false Chr06: 53170361-53170860 Sorghum bicolor
Sobic.006G176400 1.0kb upstream 1.0kb upstream 3746 true Chr06: 53166615-53170360 Sorghum bicolor
Sobic.006G176400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53166615-53167614 Sorghum bicolor
Sobic.006G176400 1.0kb downstream 1.0kb downstream 3746 true Chr06: 53167615-53171360 Sorghum bicolor
Sobic.006G176400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53170361-53171360 Sorghum bicolor
Sobic.006G176400 2.0kb upstream 2.0kb upstream 4746 true Chr06: 53165615-53170360 Sorghum bicolor
Sobic.006G176400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53165615-53167614 Sorghum bicolor
Sobic.006G176400 2.0kb downstream 2.0kb downstream 4746 true Chr06: 53167615-53172360 Sorghum bicolor
Sobic.006G176400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53170361-53172360 Sorghum bicolor
Sobic.006G176400 5.0kb upstream 5.0kb upstream 7746 true Chr06: 53162615-53170360 Sorghum bicolor
Sobic.006G176400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53162615-53167614 Sorghum bicolor
Sobic.006G176400 5.0kb downstream 5.0kb downstream 7746 true Chr06: 53167615-53175360 Sorghum bicolor
Sobic.006G176400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53170361-53175360 Sorghum bicolor
Sobic.006G176400 10.0kb upstream 10.0kb upstream 12746 true Chr06: 53157615-53170360 Sorghum bicolor
Sobic.006G176400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53157615-53167614 Sorghum bicolor
Sobic.006G176400 10.0kb downstream 10.0kb downstream 12746 true Chr06: 53167615-53180360 Sorghum bicolor
Sobic.006G176400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53170361-53180360 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028009 5273 Angiosperm View MSA
122187682 5267 Panicoideae View MSA
124579854 5269 Grass View MSA
121297565 5274 Embryophyte View MSA
123335608 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.129        
cufflinks 0.041       Low
cufflinks 0.003     Low Low
cufflinks 0.005     Low Low
cufflinks 4.322       High
cufflinks 0.069     Low  
cufflinks 1.568        
cufflinks 0.156        
cufflinks 0.092        
cufflinks 0.212        
cufflinks 1.279        
cufflinks 1.061        
cufflinks 0.307        
cufflinks 1.191        
cufflinks 0.429        
cufflinks 0.031     Low Low
cufflinks 1.074        
cufflinks 1.328        
cufflinks 0.006     Low Low
cufflinks 1.013        
cufflinks 2.701        
cufflinks 2.696        
cufflinks 1.419        
cufflinks 1.646        
cufflinks 0.009     Low Low
cufflinks 0.048        
cufflinks 0.417        
cufflinks 0.005     Low Low
cufflinks 0.338        
cufflinks 0.86        

0 Strain