Gene : Sobic.006G189100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10825//PTHR10825:SF26 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT // SUBFAMILY NOT NAMED Genomic Order:  1969
Name:  ? Sobic.006G189100 Secondary Identifier:  ? PAC:37945911
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G189100 0.5kb upstream 0.5kb upstream 2375 true Chr06: 54362215-54364589 Sorghum bicolor
Sobic.006G189100 0.5kb upstream 0.5kb upstream 500 false Chr06: 54362215-54362714 Sorghum bicolor
Sobic.006G189100 0.5kb downstream 0.5kb downstream 2375 true Chr06: 54362715-54365089 Sorghum bicolor
Sobic.006G189100 0.5kb downstream 0.5kb downstream 500 false Chr06: 54364590-54365089 Sorghum bicolor
Sobic.006G189100 1.0kb upstream 1.0kb upstream 2875 true Chr06: 54361715-54364589 Sorghum bicolor
Sobic.006G189100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 54361715-54362714 Sorghum bicolor
Sobic.006G189100 1.0kb downstream 1.0kb downstream 2875 true Chr06: 54362715-54365589 Sorghum bicolor
Sobic.006G189100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 54364590-54365589 Sorghum bicolor
Sobic.006G189100 2.0kb upstream 2.0kb upstream 3875 true Chr06: 54360715-54364589 Sorghum bicolor
Sobic.006G189100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 54360715-54362714 Sorghum bicolor
Sobic.006G189100 2.0kb downstream 2.0kb downstream 3875 true Chr06: 54362715-54366589 Sorghum bicolor
Sobic.006G189100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 54364590-54366589 Sorghum bicolor
Sobic.006G189100 5.0kb upstream 5.0kb upstream 6875 true Chr06: 54357715-54364589 Sorghum bicolor
Sobic.006G189100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 54357715-54362714 Sorghum bicolor
Sobic.006G189100 5.0kb downstream 5.0kb downstream 6875 true Chr06: 54362715-54369589 Sorghum bicolor
Sobic.006G189100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 54364590-54369589 Sorghum bicolor
Sobic.006G189100 10.0kb upstream 10.0kb upstream 11875 true Chr06: 54352715-54364589 Sorghum bicolor
Sobic.006G189100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 54352715-54362714 Sorghum bicolor
Sobic.006G189100 10.0kb downstream 10.0kb downstream 11875 true Chr06: 54362715-54374589 Sorghum bicolor
Sobic.006G189100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 54364590-54374589 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190784 5267 Panicoideae View MSA
124572519 5269 Grass View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.336       High
cufflinks 0.239       Low
cufflinks 0.371       Low
cufflinks 0.997        
cufflinks 1.566        
cufflinks 1.647        
cufflinks 1.655        
cufflinks 0.423       Low
cufflinks 1.487        
cufflinks 1.827        
cufflinks 0.841        
cufflinks 1.445        
cufflinks 1.379        
cufflinks 1.249        
cufflinks 1.706        
cufflinks 0.383       Low
cufflinks 1.626        
cufflinks 1.342        
cufflinks 0.54       Low
cufflinks 1.444        
cufflinks 4.826       High
cufflinks 0.848        
cufflinks 1.23        
cufflinks 1.463        
cufflinks 0.283       Low
cufflinks 0.188       Low
cufflinks 0.924        
cufflinks 4.502       High
cufflinks 0.951        
cufflinks 2.263        

0 Strain