Gene : Sobic.006G180600 S. bicolor v3.1.1
Defline:  similar to OSIGBa0158F05.10 protein Genomic Order:  1885
Name:  ? Sobic.006G180600 Secondary Identifier:  ? PAC:37947406
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G180600 0.5kb upstream 0.5kb upstream 3562 true Chr06: 53485171-53488732 Sorghum bicolor
Sobic.006G180600 0.5kb upstream 0.5kb upstream 500 false Chr06: 53488233-53488732 Sorghum bicolor
Sobic.006G180600 0.5kb downstream 0.5kb downstream 3562 true Chr06: 53484671-53488232 Sorghum bicolor
Sobic.006G180600 0.5kb downstream 0.5kb downstream 500 false Chr06: 53484671-53485170 Sorghum bicolor
Sobic.006G180600 1.0kb upstream 1.0kb upstream 4062 true Chr06: 53485171-53489232 Sorghum bicolor
Sobic.006G180600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53488233-53489232 Sorghum bicolor
Sobic.006G180600 1.0kb downstream 1.0kb downstream 4062 true Chr06: 53484171-53488232 Sorghum bicolor
Sobic.006G180600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53484171-53485170 Sorghum bicolor
Sobic.006G180600 2.0kb upstream 2.0kb upstream 5062 true Chr06: 53485171-53490232 Sorghum bicolor
Sobic.006G180600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53488233-53490232 Sorghum bicolor
Sobic.006G180600 2.0kb downstream 2.0kb downstream 5062 true Chr06: 53483171-53488232 Sorghum bicolor
Sobic.006G180600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53483171-53485170 Sorghum bicolor
Sobic.006G180600 5.0kb upstream 5.0kb upstream 8062 true Chr06: 53485171-53493232 Sorghum bicolor
Sobic.006G180600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53488233-53493232 Sorghum bicolor
Sobic.006G180600 5.0kb downstream 5.0kb downstream 8062 true Chr06: 53480171-53488232 Sorghum bicolor
Sobic.006G180600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53480171-53485170 Sorghum bicolor
Sobic.006G180600 10.0kb upstream 10.0kb upstream 13062 true Chr06: 53485171-53498232 Sorghum bicolor
Sobic.006G180600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53488233-53498232 Sorghum bicolor
Sobic.006G180600 10.0kb downstream 10.0kb downstream 13062 true Chr06: 53475171-53488232 Sorghum bicolor
Sobic.006G180600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53475171-53485170 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185949 5267 Panicoideae View MSA
124568593 5269 Grass View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.897     High High
cufflinks 1.007       Low
cufflinks 1.541        
cufflinks 4.245       High
cufflinks 2.158        
cufflinks 5.075       High
cufflinks 1.554        
cufflinks 1.043       Low
cufflinks 2.501        
cufflinks 2.622        
cufflinks 1.26        
cufflinks 1.452        
cufflinks 2.349        
cufflinks 1.583        
cufflinks 2.299        
cufflinks 1.232        
cufflinks 1.32        
cufflinks 1.302        
cufflinks 1.759        
cufflinks 1.892        
cufflinks 1.7        
cufflinks 2.198        
cufflinks 1.612        
cufflinks 1.126       Low
cufflinks 1.653        
cufflinks 0.976       Low
cufflinks 2.187        
cufflinks 4.196       High
cufflinks 1.384        
cufflinks 2.721        

0 Strain