Gene : Sobic.006G181800 S. bicolor v3.1.1
Defline:  (1 of 1) K16573 - gamma-tubulin complex component 6 (TUBGCP6, GCP6) Genomic Order:  1897
Name:  ? Sobic.006G181800 Secondary Identifier:  ? PAC:37947709
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G181800 0.5kb upstream 0.5kb upstream 18054 true Chr06: 53650807-53668860 Sorghum bicolor
Sobic.006G181800 0.5kb upstream 0.5kb upstream 500 false Chr06: 53668361-53668860 Sorghum bicolor
Sobic.006G181800 0.5kb downstream 0.5kb downstream 18054 true Chr06: 53650307-53668360 Sorghum bicolor
Sobic.006G181800 0.5kb downstream 0.5kb downstream 500 false Chr06: 53650307-53650806 Sorghum bicolor
Sobic.006G181800 1.0kb upstream 1.0kb upstream 18554 true Chr06: 53650807-53669360 Sorghum bicolor
Sobic.006G181800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53668361-53669360 Sorghum bicolor
Sobic.006G181800 1.0kb downstream 1.0kb downstream 18554 true Chr06: 53649807-53668360 Sorghum bicolor
Sobic.006G181800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53649807-53650806 Sorghum bicolor
Sobic.006G181800 2.0kb upstream 2.0kb upstream 19554 true Chr06: 53650807-53670360 Sorghum bicolor
Sobic.006G181800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53668361-53670360 Sorghum bicolor
Sobic.006G181800 2.0kb downstream 2.0kb downstream 19554 true Chr06: 53648807-53668360 Sorghum bicolor
Sobic.006G181800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53648807-53650806 Sorghum bicolor
Sobic.006G181800 5.0kb upstream 5.0kb upstream 22554 true Chr06: 53650807-53673360 Sorghum bicolor
Sobic.006G181800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53668361-53673360 Sorghum bicolor
Sobic.006G181800 5.0kb downstream 5.0kb downstream 22554 true Chr06: 53645807-53668360 Sorghum bicolor
Sobic.006G181800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53645807-53650806 Sorghum bicolor
Sobic.006G181800 10.0kb upstream 10.0kb upstream 27554 true Chr06: 53650807-53678360 Sorghum bicolor
Sobic.006G181800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53668361-53678360 Sorghum bicolor
Sobic.006G181800 10.0kb downstream 10.0kb downstream 27554 true Chr06: 53640807-53668360 Sorghum bicolor
Sobic.006G181800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53640807-53650806 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041339 5273 Angiosperm View MSA
122178365 5267 Panicoideae View MSA
124581280 5269 Grass View MSA
121345944 5274 Embryophyte View MSA
123428052 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078     Low  
cufflinks 0.011     Low Low
cufflinks 0.044     Low  
cufflinks 0.05     Low  
cufflinks 0.259       High
cufflinks 0.073     Low  
cufflinks 0.13        
cufflinks 0.038     Low Low
cufflinks 0.153        
cufflinks 0.143        
cufflinks 0.147        
cufflinks 0.143        
cufflinks 0.15        
cufflinks 0.122        
cufflinks 0.141        
cufflinks 0.018     Low Low
cufflinks 0.111        
cufflinks 0.125        
cufflinks 0.04     Low Low
cufflinks 0.126        
cufflinks 0.28       High
cufflinks 0.145        
cufflinks 0.136        
cufflinks 0.144        
cufflinks 0.031     Low Low
cufflinks 0.012     Low Low
cufflinks 0.15        
cufflinks 0.024     Low Low
cufflinks 0.118        
cufflinks 0.162        

0 Strain