Gene : Sobic.006G181000 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR22891//PTHR22891:SF34 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // SUBFAMILY NOT NAMED Genomic Order:  1890
Name:  ? Sobic.006G181000 Secondary Identifier:  ? PAC:37946376
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G181000 0.5kb upstream 0.5kb upstream 11005 true Chr06: 53559399-53570403 Sorghum bicolor
Sobic.006G181000 0.5kb upstream 0.5kb upstream 500 false Chr06: 53569904-53570403 Sorghum bicolor
Sobic.006G181000 0.5kb downstream 0.5kb downstream 11005 true Chr06: 53558899-53569903 Sorghum bicolor
Sobic.006G181000 0.5kb downstream 0.5kb downstream 500 false Chr06: 53558899-53559398 Sorghum bicolor
Sobic.006G181000 1.0kb upstream 1.0kb upstream 11505 true Chr06: 53559399-53570903 Sorghum bicolor
Sobic.006G181000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53569904-53570903 Sorghum bicolor
Sobic.006G181000 1.0kb downstream 1.0kb downstream 11505 true Chr06: 53558399-53569903 Sorghum bicolor
Sobic.006G181000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53558399-53559398 Sorghum bicolor
Sobic.006G181000 2.0kb upstream 2.0kb upstream 12505 true Chr06: 53559399-53571903 Sorghum bicolor
Sobic.006G181000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53569904-53571903 Sorghum bicolor
Sobic.006G181000 2.0kb downstream 2.0kb downstream 12505 true Chr06: 53557399-53569903 Sorghum bicolor
Sobic.006G181000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53557399-53559398 Sorghum bicolor
Sobic.006G181000 5.0kb upstream 5.0kb upstream 15505 true Chr06: 53559399-53574903 Sorghum bicolor
Sobic.006G181000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53569904-53574903 Sorghum bicolor
Sobic.006G181000 5.0kb downstream 5.0kb downstream 15505 true Chr06: 53554399-53569903 Sorghum bicolor
Sobic.006G181000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53554399-53559398 Sorghum bicolor
Sobic.006G181000 10.0kb upstream 10.0kb upstream 20505 true Chr06: 53559399-53579903 Sorghum bicolor
Sobic.006G181000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53569904-53579903 Sorghum bicolor
Sobic.006G181000 10.0kb downstream 10.0kb downstream 20505 true Chr06: 53549399-53569903 Sorghum bicolor
Sobic.006G181000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53549399-53559398 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182534 5267 Panicoideae View MSA
124573264 5269 Grass View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.183       Low
cufflinks 42.704     High  
cufflinks 8.076       Low
cufflinks 8.309       Low
cufflinks 50.083     High  
cufflinks 13.03       Low
cufflinks 32.587     High  
cufflinks 47.312     High  
cufflinks 47.535     High  
cufflinks 45.946     High  
cufflinks 56.583     High  
cufflinks 35.513     High  
cufflinks 56.582     High  
cufflinks 36.137     High  
cufflinks 25.882     High  
cufflinks 30.48     High  
cufflinks 33.343     High  
cufflinks 31.538     High  
cufflinks 22.265     High  
cufflinks 31.073     High  
cufflinks 125.298     High High
cufflinks 33.271     High  
cufflinks 31.305     High  
cufflinks 32.544     High  
cufflinks 56.331     High  
cufflinks 66.069     High High
cufflinks 27.726     High  
cufflinks 2.715       Low
cufflinks 29.665     High  
cufflinks 33.25     High  

0 Strain