Gene : Sobic.002G424100 S. bicolor v3.1.1
Defline:  (1 of 1) PF00581//PF13616 - Rhodanese-like domain (Rhodanese) // PPIC-type PPIASE domain (Rotamase_3) Genomic Order:  4337
Name:  ? Sobic.002G424100 Secondary Identifier:  ? PAC:37955290
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G424100 0.5kb upstream 0.5kb upstream 9517 true Chr02: 77112447-77121963 Sorghum bicolor
Sobic.002G424100 0.5kb upstream 0.5kb upstream 500 false Chr02: 77121464-77121963 Sorghum bicolor
Sobic.002G424100 0.5kb downstream 0.5kb downstream 9517 true Chr02: 77111947-77121463 Sorghum bicolor
Sobic.002G424100 0.5kb downstream 0.5kb downstream 500 false Chr02: 77111947-77112446 Sorghum bicolor
Sobic.002G424100 1.0kb upstream 1.0kb upstream 10017 true Chr02: 77112447-77122463 Sorghum bicolor
Sobic.002G424100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 77121464-77122463 Sorghum bicolor
Sobic.002G424100 1.0kb downstream 1.0kb downstream 10017 true Chr02: 77111447-77121463 Sorghum bicolor
Sobic.002G424100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 77111447-77112446 Sorghum bicolor
Sobic.002G424100 2.0kb upstream 2.0kb upstream 11017 true Chr02: 77112447-77123463 Sorghum bicolor
Sobic.002G424100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 77121464-77123463 Sorghum bicolor
Sobic.002G424100 2.0kb downstream 2.0kb downstream 11017 true Chr02: 77110447-77121463 Sorghum bicolor
Sobic.002G424100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 77110447-77112446 Sorghum bicolor
Sobic.002G424100 5.0kb upstream 5.0kb upstream 14017 true Chr02: 77112447-77126463 Sorghum bicolor
Sobic.002G424100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 77121464-77126463 Sorghum bicolor
Sobic.002G424100 5.0kb downstream 5.0kb downstream 14017 true Chr02: 77107447-77121463 Sorghum bicolor
Sobic.002G424100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 77107447-77112446 Sorghum bicolor
Sobic.002G424100 10.0kb upstream 10.0kb upstream 19017 true Chr02: 77112447-77131463 Sorghum bicolor
Sobic.002G424100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 77121464-77131463 Sorghum bicolor
Sobic.002G424100 10.0kb downstream 10.0kb downstream 19017 true Chr02: 77102447-77121463 Sorghum bicolor
Sobic.002G424100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 77102447-77112446 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189859 5267 Panicoideae View MSA
124577606 5269 Grass View MSA
122041568 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121344744 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.652       Low
cufflinks 3.724       High
cufflinks 3.115       High
cufflinks 3.266       High
cufflinks 1.407        
cufflinks 2.204        
cufflinks 3.551       High
cufflinks 5.41       High
cufflinks 1.14        
cufflinks 1.319        
cufflinks 1.48        
cufflinks 0.875        
cufflinks 1.143        
cufflinks 0.813       Low
cufflinks 1.05        
cufflinks 1.767        
cufflinks 3.632       High
cufflinks 3.989       High
cufflinks 1.294        
cufflinks 1.794        
cufflinks 0.9        
cufflinks 0.868        
cufflinks 1.392        
cufflinks 1.236        
cufflinks 2.014        
cufflinks 3.556       High
cufflinks 1.201        
cufflinks 0.438       Low
cufflinks 5.295       High
cufflinks 0.925        

0 Strain