Gene : Sobic.002G424350 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4339
Name:  ? Sobic.002G424350 Secondary Identifier:  ? PAC:37953203
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G424350 0.5kb upstream 0.5kb upstream 4932 true Chr02: 77126254-77131185 Sorghum bicolor
Sobic.002G424350 0.5kb upstream 0.5kb upstream 500 false Chr02: 77126254-77126753 Sorghum bicolor
Sobic.002G424350 0.5kb downstream 0.5kb downstream 4932 true Chr02: 77126754-77131685 Sorghum bicolor
Sobic.002G424350 0.5kb downstream 0.5kb downstream 500 false Chr02: 77131186-77131685 Sorghum bicolor
Sobic.002G424350 1.0kb upstream 1.0kb upstream 5432 true Chr02: 77125754-77131185 Sorghum bicolor
Sobic.002G424350 1.0kb upstream 1.0kb upstream 1000 false Chr02: 77125754-77126753 Sorghum bicolor
Sobic.002G424350 1.0kb downstream 1.0kb downstream 5432 true Chr02: 77126754-77132185 Sorghum bicolor
Sobic.002G424350 1.0kb downstream 1.0kb downstream 1000 false Chr02: 77131186-77132185 Sorghum bicolor
Sobic.002G424350 2.0kb upstream 2.0kb upstream 6432 true Chr02: 77124754-77131185 Sorghum bicolor
Sobic.002G424350 2.0kb upstream 2.0kb upstream 2000 false Chr02: 77124754-77126753 Sorghum bicolor
Sobic.002G424350 2.0kb downstream 2.0kb downstream 6432 true Chr02: 77126754-77133185 Sorghum bicolor
Sobic.002G424350 2.0kb downstream 2.0kb downstream 2000 false Chr02: 77131186-77133185 Sorghum bicolor
Sobic.002G424350 5.0kb upstream 5.0kb upstream 9432 true Chr02: 77121754-77131185 Sorghum bicolor
Sobic.002G424350 5.0kb upstream 5.0kb upstream 5000 false Chr02: 77121754-77126753 Sorghum bicolor
Sobic.002G424350 5.0kb downstream 5.0kb downstream 9432 true Chr02: 77126754-77136185 Sorghum bicolor
Sobic.002G424350 5.0kb downstream 5.0kb downstream 5000 false Chr02: 77131186-77136185 Sorghum bicolor
Sobic.002G424350 10.0kb upstream 10.0kb upstream 14432 true Chr02: 77116754-77131185 Sorghum bicolor
Sobic.002G424350 10.0kb upstream 10.0kb upstream 10000 false Chr02: 77116754-77126753 Sorghum bicolor
Sobic.002G424350 10.0kb downstream 10.0kb downstream 14432 true Chr02: 77126754-77141185 Sorghum bicolor
Sobic.002G424350 10.0kb downstream 10.0kb downstream 10000 false Chr02: 77131186-77141185 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190965 5267 Panicoideae View MSA
124466123 5269 Grass View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.726     High  
cufflinks 113.554     High  
cufflinks 110.484     High  
cufflinks 165.965     High High
cufflinks 51.834     High Low
cufflinks 33.266     High Low
cufflinks 128.964     High  
cufflinks 105.25     High  
cufflinks 44.433     High Low
cufflinks 66.541     High  
cufflinks 79.331     High  
cufflinks 113.119     High  
cufflinks 96.833     High  
cufflinks 86.251     High  
cufflinks 92.743     High  
cufflinks 120.214     High  
cufflinks 155.648     High High
cufflinks 142.995     High High
cufflinks 103.325     High  
cufflinks 177.783     High High
cufflinks 26.341     High Low
cufflinks 81.497     High  
cufflinks 117.572     High  
cufflinks 112.737     High  
cufflinks 92.715     High  
cufflinks 63.697     High  
cufflinks 92.386     High  
cufflinks 20.881     High Low
cufflinks 152.894     High High
cufflinks 92.767     High  

0 Strain