Gene : Sobic.006G252300 S. bicolor v3.1.1
Defline:  (1 of 10) PF03909 - BSD domain (BSD) Genomic Order:  2636
Name:  ? Sobic.006G252300 Secondary Identifier:  ? PAC:37946810
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G252300 0.5kb upstream 0.5kb upstream 3034 true Chr06: 59029249-59032282 Sorghum bicolor
Sobic.006G252300 0.5kb upstream 0.5kb upstream 500 false Chr06: 59029249-59029748 Sorghum bicolor
Sobic.006G252300 0.5kb downstream 0.5kb downstream 3034 true Chr06: 59029749-59032782 Sorghum bicolor
Sobic.006G252300 0.5kb downstream 0.5kb downstream 500 false Chr06: 59032283-59032782 Sorghum bicolor
Sobic.006G252300 1.0kb upstream 1.0kb upstream 3534 true Chr06: 59028749-59032282 Sorghum bicolor
Sobic.006G252300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59028749-59029748 Sorghum bicolor
Sobic.006G252300 1.0kb downstream 1.0kb downstream 3534 true Chr06: 59029749-59033282 Sorghum bicolor
Sobic.006G252300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59032283-59033282 Sorghum bicolor
Sobic.006G252300 2.0kb upstream 2.0kb upstream 4534 true Chr06: 59027749-59032282 Sorghum bicolor
Sobic.006G252300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59027749-59029748 Sorghum bicolor
Sobic.006G252300 2.0kb downstream 2.0kb downstream 4534 true Chr06: 59029749-59034282 Sorghum bicolor
Sobic.006G252300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59032283-59034282 Sorghum bicolor
Sobic.006G252300 5.0kb upstream 5.0kb upstream 7534 true Chr06: 59024749-59032282 Sorghum bicolor
Sobic.006G252300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59024749-59029748 Sorghum bicolor
Sobic.006G252300 5.0kb downstream 5.0kb downstream 7534 true Chr06: 59029749-59037282 Sorghum bicolor
Sobic.006G252300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59032283-59037282 Sorghum bicolor
Sobic.006G252300 10.0kb upstream 10.0kb upstream 12534 true Chr06: 59019749-59032282 Sorghum bicolor
Sobic.006G252300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59019749-59029748 Sorghum bicolor
Sobic.006G252300 10.0kb downstream 10.0kb downstream 12534 true Chr06: 59029749-59042282 Sorghum bicolor
Sobic.006G252300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59032283-59042282 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182387 5267 Panicoideae View MSA
124573904 5269 Grass View MSA
122050169 5273 Angiosperm View MSA
121311775 5274 Embryophyte View MSA
123349027 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.82       High
cufflinks 1.191       Low
cufflinks 1.38        
cufflinks 3.493       High
cufflinks 1.57        
cufflinks 5.416       High
cufflinks 2.156        
cufflinks 1.28        
cufflinks 3.081        
cufflinks 2.237        
cufflinks 2.03        
cufflinks 1.714        
cufflinks 1.795        
cufflinks 1.589        
cufflinks 1.694        
cufflinks 2.571        
cufflinks 3.106        
cufflinks 2.282        
cufflinks 1.364        
cufflinks 3.269       High
cufflinks 2.017        
cufflinks 2.914        
cufflinks 2.113        
cufflinks 1.661        
cufflinks 1.629        
cufflinks 0.778       Low
cufflinks 1.781        
cufflinks 6.105       High
cufflinks 2.214        
cufflinks 1.915        

0 Strain