Gene : Sobic.006G275000 S. bicolor v3.1.1
Defline:  (1 of 3) 3.6.5.6 - Tubulin GTPase Genomic Order:  2874
Name:  ? Sobic.006G275000 Secondary Identifier:  ? PAC:37946417
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G275000 0.5kb upstream 0.5kb upstream 4003 true Chr06: 60629467-60633469 Sorghum bicolor
Sobic.006G275000 0.5kb upstream 0.5kb upstream 500 false Chr06: 60629467-60629966 Sorghum bicolor
Sobic.006G275000 0.5kb downstream 0.5kb downstream 4003 true Chr06: 60629967-60633969 Sorghum bicolor
Sobic.006G275000 0.5kb downstream 0.5kb downstream 500 false Chr06: 60633470-60633969 Sorghum bicolor
Sobic.006G275000 1.0kb upstream 1.0kb upstream 4503 true Chr06: 60628967-60633469 Sorghum bicolor
Sobic.006G275000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 60628967-60629966 Sorghum bicolor
Sobic.006G275000 1.0kb downstream 1.0kb downstream 4503 true Chr06: 60629967-60634469 Sorghum bicolor
Sobic.006G275000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 60633470-60634469 Sorghum bicolor
Sobic.006G275000 2.0kb upstream 2.0kb upstream 5503 true Chr06: 60627967-60633469 Sorghum bicolor
Sobic.006G275000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 60627967-60629966 Sorghum bicolor
Sobic.006G275000 2.0kb downstream 2.0kb downstream 5503 true Chr06: 60629967-60635469 Sorghum bicolor
Sobic.006G275000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 60633470-60635469 Sorghum bicolor
Sobic.006G275000 5.0kb upstream 5.0kb upstream 8503 true Chr06: 60624967-60633469 Sorghum bicolor
Sobic.006G275000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 60624967-60629966 Sorghum bicolor
Sobic.006G275000 5.0kb downstream 5.0kb downstream 8503 true Chr06: 60629967-60638469 Sorghum bicolor
Sobic.006G275000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 60633470-60638469 Sorghum bicolor
Sobic.006G275000 10.0kb upstream 10.0kb upstream 13503 true Chr06: 60619967-60633469 Sorghum bicolor
Sobic.006G275000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 60619967-60629966 Sorghum bicolor
Sobic.006G275000 10.0kb downstream 10.0kb downstream 13503 true Chr06: 60629967-60643469 Sorghum bicolor
Sobic.006G275000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 60633470-60643469 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041219 5273 Angiosperm View MSA
122185444 5267 Panicoideae View MSA
124589822 5269 Grass View MSA
123428991 5275 Viridiplantae View MSA
121347273 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.962        
cufflinks 3.187       Low
cufflinks 5.848        
cufflinks 9.716        
cufflinks 27.335     High High
cufflinks 7.721        
cufflinks 15.949     High  
cufflinks 7.457        
cufflinks 13.163     High  
cufflinks 12.726     High  
cufflinks 6.267        
cufflinks 7.737        
cufflinks 10.444        
cufflinks 7.768        
cufflinks 10.412        
cufflinks 4.403       Low
cufflinks 15.063     High  
cufflinks 15.945     High  
cufflinks 7.936        
cufflinks 16.136     High  
cufflinks 27.857     High High
cufflinks 8.839        
cufflinks 7.752        
cufflinks 8.901        
cufflinks 4.509       Low
cufflinks 2.975       Low
cufflinks 7.75        
cufflinks 3.39       Low
cufflinks 19.145     High High
cufflinks 15.955     High  

0 Strain