Gene : Sobic.006G260200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR27000//PTHR27000:SF43 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MLD14 Genomic Order:  2719
Name:  ? Sobic.006G260200 Secondary Identifier:  ? PAC:37947297
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G260200 0.5kb upstream 0.5kb upstream 2210 true Chr06: 59551671-59553880 Sorghum bicolor
Sobic.006G260200 0.5kb upstream 0.5kb upstream 500 false Chr06: 59551671-59552170 Sorghum bicolor
Sobic.006G260200 0.5kb downstream 0.5kb downstream 2210 true Chr06: 59552171-59554380 Sorghum bicolor
Sobic.006G260200 0.5kb downstream 0.5kb downstream 500 false Chr06: 59553881-59554380 Sorghum bicolor
Sobic.006G260200 1.0kb upstream 1.0kb upstream 2710 true Chr06: 59551171-59553880 Sorghum bicolor
Sobic.006G260200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59551171-59552170 Sorghum bicolor
Sobic.006G260200 1.0kb downstream 1.0kb downstream 2710 true Chr06: 59552171-59554880 Sorghum bicolor
Sobic.006G260200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59553881-59554880 Sorghum bicolor
Sobic.006G260200 2.0kb upstream 2.0kb upstream 3710 true Chr06: 59550171-59553880 Sorghum bicolor
Sobic.006G260200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59550171-59552170 Sorghum bicolor
Sobic.006G260200 2.0kb downstream 2.0kb downstream 3710 true Chr06: 59552171-59555880 Sorghum bicolor
Sobic.006G260200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59553881-59555880 Sorghum bicolor
Sobic.006G260200 5.0kb upstream 5.0kb upstream 6710 true Chr06: 59547171-59553880 Sorghum bicolor
Sobic.006G260200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59547171-59552170 Sorghum bicolor
Sobic.006G260200 5.0kb downstream 5.0kb downstream 6710 true Chr06: 59552171-59558880 Sorghum bicolor
Sobic.006G260200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59553881-59558880 Sorghum bicolor
Sobic.006G260200 10.0kb upstream 10.0kb upstream 11710 true Chr06: 59542171-59553880 Sorghum bicolor
Sobic.006G260200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59542171-59552170 Sorghum bicolor
Sobic.006G260200 10.0kb downstream 10.0kb downstream 11710 true Chr06: 59552171-59563880 Sorghum bicolor
Sobic.006G260200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59553881-59563880 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176074 5267 Panicoideae View MSA
124590516 5269 Grass View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.475        
cufflinks 0.007     Low Low
cufflinks 0.051     Low Low
cufflinks 0.03     Low Low
cufflinks 3.804        
cufflinks 0.058     Low Low
cufflinks 2.984        
cufflinks 4.645        
cufflinks 0.08     Low Low
cufflinks 0.234        
cufflinks 12.047     High  
cufflinks 5.803        
cufflinks 4.823        
cufflinks 12.325     High  
cufflinks 1.495        
cufflinks 0.075     Low Low
cufflinks 1.752        
cufflinks 1.449        
cufflinks 0.308        
cufflinks 0.867        
cufflinks 0.074     Low Low
cufflinks 14.207     High High
cufflinks 5.774        
cufflinks 5.287        
cufflinks 0.034     Low Low
cufflinks 0.058       Low
cufflinks 3.85        
cufflinks 0.027     Low Low
cufflinks 5.381        
cufflinks 0.437        

0 Strain