Gene : Sobic.006G262100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31384:SF2 - AUXIN RESPONSE FACTOR 8 Genomic Order:  2740
Name:  ? Sobic.006G262100 Secondary Identifier:  ? PAC:37945951
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G262100 0.5kb upstream 0.5kb upstream 8126 true Chr06: 59707561-59715686 Sorghum bicolor
Sobic.006G262100 0.5kb upstream 0.5kb upstream 500 false Chr06: 59707561-59708060 Sorghum bicolor
Sobic.006G262100 0.5kb downstream 0.5kb downstream 8126 true Chr06: 59708061-59716186 Sorghum bicolor
Sobic.006G262100 0.5kb downstream 0.5kb downstream 500 false Chr06: 59715687-59716186 Sorghum bicolor
Sobic.006G262100 1.0kb upstream 1.0kb upstream 8626 true Chr06: 59707061-59715686 Sorghum bicolor
Sobic.006G262100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59707061-59708060 Sorghum bicolor
Sobic.006G262100 1.0kb downstream 1.0kb downstream 8626 true Chr06: 59708061-59716686 Sorghum bicolor
Sobic.006G262100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59715687-59716686 Sorghum bicolor
Sobic.006G262100 2.0kb upstream 2.0kb upstream 9626 true Chr06: 59706061-59715686 Sorghum bicolor
Sobic.006G262100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59706061-59708060 Sorghum bicolor
Sobic.006G262100 2.0kb downstream 2.0kb downstream 9626 true Chr06: 59708061-59717686 Sorghum bicolor
Sobic.006G262100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59715687-59717686 Sorghum bicolor
Sobic.006G262100 5.0kb upstream 5.0kb upstream 12626 true Chr06: 59703061-59715686 Sorghum bicolor
Sobic.006G262100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59703061-59708060 Sorghum bicolor
Sobic.006G262100 5.0kb downstream 5.0kb downstream 12626 true Chr06: 59708061-59720686 Sorghum bicolor
Sobic.006G262100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59715687-59720686 Sorghum bicolor
Sobic.006G262100 10.0kb upstream 10.0kb upstream 17626 true Chr06: 59698061-59715686 Sorghum bicolor
Sobic.006G262100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59698061-59708060 Sorghum bicolor
Sobic.006G262100 10.0kb downstream 10.0kb downstream 17626 true Chr06: 59708061-59725686 Sorghum bicolor
Sobic.006G262100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59715687-59725686 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181848 5267 Panicoideae View MSA
124574906 5269 Grass View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.475       Low
cufflinks 9.092     High  
cufflinks 8.225        
cufflinks 4.897       Low
cufflinks 126.87     High High
cufflinks 9.776        
cufflinks 24.049     High  
cufflinks 13.272     High  
cufflinks 28.729     High  
cufflinks 32.863     High  
cufflinks 9.04        
cufflinks 12.853     High  
cufflinks 68.258     High High
cufflinks 13.071     High  
cufflinks 38.636     High  
cufflinks 4.133       Low
cufflinks 19.905     High  
cufflinks 21.385     High  
cufflinks 14.99     High  
cufflinks 19.643     High  
cufflinks 122.123     High High
cufflinks 24.177     High  
cufflinks 15.407     High  
cufflinks 17.677     High  
cufflinks 6.988       Low
cufflinks 8.882     High  
cufflinks 6.317       Low
cufflinks 2.575       Low
cufflinks 15.512     High  
cufflinks 23.757     High  

0 Strain