Gene : Sobic.006G261500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10742//PTHR10742:SF264 - AMINE OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  2732
Name:  ? Sobic.006G261500 Secondary Identifier:  ? PAC:37946514
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6441 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G261500 0.5kb upstream 0.5kb upstream 3881 true Chr06: 59630132-59634012 Sorghum bicolor
Sobic.006G261500 0.5kb upstream 0.5kb upstream 500 false Chr06: 59633513-59634012 Sorghum bicolor
Sobic.006G261500 0.5kb downstream 0.5kb downstream 3881 true Chr06: 59629632-59633512 Sorghum bicolor
Sobic.006G261500 0.5kb downstream 0.5kb downstream 500 false Chr06: 59629632-59630131 Sorghum bicolor
Sobic.006G261500 1.0kb upstream 1.0kb upstream 4381 true Chr06: 59630132-59634512 Sorghum bicolor
Sobic.006G261500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59633513-59634512 Sorghum bicolor
Sobic.006G261500 1.0kb downstream 1.0kb downstream 4381 true Chr06: 59629132-59633512 Sorghum bicolor
Sobic.006G261500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59629132-59630131 Sorghum bicolor
Sobic.006G261500 2.0kb upstream 2.0kb upstream 5381 true Chr06: 59630132-59635512 Sorghum bicolor
Sobic.006G261500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59633513-59635512 Sorghum bicolor
Sobic.006G261500 2.0kb downstream 2.0kb downstream 5381 true Chr06: 59628132-59633512 Sorghum bicolor
Sobic.006G261500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59628132-59630131 Sorghum bicolor
Sobic.006G261500 5.0kb upstream 5.0kb upstream 8381 true Chr06: 59630132-59638512 Sorghum bicolor
Sobic.006G261500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59633513-59638512 Sorghum bicolor
Sobic.006G261500 5.0kb downstream 5.0kb downstream 8381 true Chr06: 59625132-59633512 Sorghum bicolor
Sobic.006G261500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59625132-59630131 Sorghum bicolor
Sobic.006G261500 10.0kb upstream 10.0kb upstream 13381 true Chr06: 59630132-59643512 Sorghum bicolor
Sobic.006G261500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59633513-59643512 Sorghum bicolor
Sobic.006G261500 10.0kb downstream 10.0kb downstream 13381 true Chr06: 59620132-59633512 Sorghum bicolor
Sobic.006G261500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59620132-59630131 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185561 5267 Panicoideae View MSA
124588297 5269 Grass View MSA
122049478 5273 Angiosperm View MSA
121311425 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.869     High High
cufflinks 11.913     High  
cufflinks 3.782       Low
cufflinks 10.571        
cufflinks 6.616       Low
cufflinks 4.338       Low
cufflinks 6.609       Low
cufflinks 7.216        
cufflinks 17.281     High High
cufflinks 32.118     High High
cufflinks 13.668     High  
cufflinks 15.209     High  
cufflinks 14.1     High  
cufflinks 14.165     High  
cufflinks 15.759     High  
cufflinks 7.81        
cufflinks 9.373        
cufflinks 5.585       Low
cufflinks 8.231        
cufflinks 15.539     High  
cufflinks 7.616        
cufflinks 13.781     High  
cufflinks 13.286     High  
cufflinks 12.665     High  
cufflinks 14.579     High  
cufflinks 7.801     High  
cufflinks 9.504        
cufflinks 12.878     High  
cufflinks 11.647     High  
cufflinks 14.682     High  

0 Strain