Gene : Sobic.006G264201 S. bicolor v3.1.1
Defline:  (1 of 1) K08917 - light-harvesting complex II chlorophyll a/b binding protein 6 (LHCB6) Genomic Order:  2762
Name:  ? Sobic.006G264201 Secondary Identifier:  ? PAC:37946755
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G264201 0.5kb upstream 0.5kb upstream 2255 true Chr06: 59863704-59865958 Sorghum bicolor
Sobic.006G264201 0.5kb upstream 0.5kb upstream 500 false Chr06: 59863704-59864203 Sorghum bicolor
Sobic.006G264201 0.5kb downstream 0.5kb downstream 2255 true Chr06: 59864204-59866458 Sorghum bicolor
Sobic.006G264201 0.5kb downstream 0.5kb downstream 500 false Chr06: 59865959-59866458 Sorghum bicolor
Sobic.006G264201 1.0kb upstream 1.0kb upstream 2755 true Chr06: 59863204-59865958 Sorghum bicolor
Sobic.006G264201 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59863204-59864203 Sorghum bicolor
Sobic.006G264201 1.0kb downstream 1.0kb downstream 2755 true Chr06: 59864204-59866958 Sorghum bicolor
Sobic.006G264201 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59865959-59866958 Sorghum bicolor
Sobic.006G264201 2.0kb upstream 2.0kb upstream 3755 true Chr06: 59862204-59865958 Sorghum bicolor
Sobic.006G264201 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59862204-59864203 Sorghum bicolor
Sobic.006G264201 2.0kb downstream 2.0kb downstream 3755 true Chr06: 59864204-59867958 Sorghum bicolor
Sobic.006G264201 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59865959-59867958 Sorghum bicolor
Sobic.006G264201 5.0kb upstream 5.0kb upstream 6755 true Chr06: 59859204-59865958 Sorghum bicolor
Sobic.006G264201 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59859204-59864203 Sorghum bicolor
Sobic.006G264201 5.0kb downstream 5.0kb downstream 6755 true Chr06: 59864204-59870958 Sorghum bicolor
Sobic.006G264201 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59865959-59870958 Sorghum bicolor
Sobic.006G264201 10.0kb upstream 10.0kb upstream 11755 true Chr06: 59854204-59865958 Sorghum bicolor
Sobic.006G264201 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59854204-59864203 Sorghum bicolor
Sobic.006G264201 10.0kb downstream 10.0kb downstream 11755 true Chr06: 59864204-59875958 Sorghum bicolor
Sobic.006G264201 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59865959-59875958 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178031 5267 Panicoideae View MSA
124575789 5269 Grass View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.867        
cufflinks 775.979     High High
cufflinks 25.039     High  
cufflinks 37.673     High  
cufflinks 2.278        
cufflinks 93.861     High  
cufflinks 195.728     High High
cufflinks 1544.199     High High
cufflinks 6.746        
cufflinks 3.378        
cufflinks 0.592       Low
cufflinks 0.633        
cufflinks 6.775        
cufflinks 0.778        
cufflinks 15.702     High  
cufflinks 121.591     High  
cufflinks 263.31     High High
cufflinks 125.983     High  
cufflinks 273.874     High High
cufflinks 184.668     High High
cufflinks 0.53       Low
cufflinks 0.385       Low
cufflinks 0.471       Low
cufflinks 0.788        
cufflinks 118.014     High  
cufflinks 997.217     High High
cufflinks 0.088     Low Low
cufflinks 0.308       Low
cufflinks 536.028     High High
cufflinks 10.852        

0 Strain