Gene : Sobic.006G265800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33925:SF2 - PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC Genomic Order:  2777
Name:  ? Sobic.006G265800 Secondary Identifier:  ? PAC:37948241
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G265800 0.5kb upstream 0.5kb upstream 5177 true Chr06: 59963422-59968598 Sorghum bicolor
Sobic.006G265800 0.5kb upstream 0.5kb upstream 500 false Chr06: 59968099-59968598 Sorghum bicolor
Sobic.006G265800 0.5kb downstream 0.5kb downstream 5177 true Chr06: 59962922-59968098 Sorghum bicolor
Sobic.006G265800 0.5kb downstream 0.5kb downstream 500 false Chr06: 59962922-59963421 Sorghum bicolor
Sobic.006G265800 1.0kb upstream 1.0kb upstream 5677 true Chr06: 59963422-59969098 Sorghum bicolor
Sobic.006G265800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 59968099-59969098 Sorghum bicolor
Sobic.006G265800 1.0kb downstream 1.0kb downstream 5677 true Chr06: 59962422-59968098 Sorghum bicolor
Sobic.006G265800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 59962422-59963421 Sorghum bicolor
Sobic.006G265800 2.0kb upstream 2.0kb upstream 6677 true Chr06: 59963422-59970098 Sorghum bicolor
Sobic.006G265800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 59968099-59970098 Sorghum bicolor
Sobic.006G265800 2.0kb downstream 2.0kb downstream 6677 true Chr06: 59961422-59968098 Sorghum bicolor
Sobic.006G265800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 59961422-59963421 Sorghum bicolor
Sobic.006G265800 5.0kb upstream 5.0kb upstream 9677 true Chr06: 59963422-59973098 Sorghum bicolor
Sobic.006G265800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 59968099-59973098 Sorghum bicolor
Sobic.006G265800 5.0kb downstream 5.0kb downstream 9677 true Chr06: 59958422-59968098 Sorghum bicolor
Sobic.006G265800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 59958422-59963421 Sorghum bicolor
Sobic.006G265800 10.0kb upstream 10.0kb upstream 14677 true Chr06: 59963422-59978098 Sorghum bicolor
Sobic.006G265800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 59968099-59978098 Sorghum bicolor
Sobic.006G265800 10.0kb downstream 10.0kb downstream 14677 true Chr06: 59953422-59968098 Sorghum bicolor
Sobic.006G265800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 59953422-59963421 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195613 5267 Panicoideae View MSA
124581901 5269 Grass View MSA
122051144 5273 Angiosperm View MSA
121351206 5274 Embryophyte View MSA
123426631 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.671       Low
cufflinks 1.816       Low
cufflinks 4.144        
cufflinks 2.756       Low
cufflinks 8.437        
cufflinks 4.261        
cufflinks 8.319        
cufflinks 5.444        
cufflinks 3.673        
cufflinks 4.969        
cufflinks 6.936        
cufflinks 6.731        
cufflinks 4.394        
cufflinks 5.807        
cufflinks 9.134        
cufflinks 3.035        
cufflinks 8.465        
cufflinks 8.674        
cufflinks 3.128        
cufflinks 7.52        
cufflinks 12.198       High
cufflinks 8.078        
cufflinks 7.022        
cufflinks 7.5        
cufflinks 2.132       Low
cufflinks 1.885       Low
cufflinks 4.197        
cufflinks 0.598       Low
cufflinks 13.68     High High
cufflinks 10.092       High

0 Strain