Gene : Sobic.006G280600 S. bicolor v3.1.1
Defline:  (1 of 1) K17262 - tubulin-folding cofactor B (TBCB, CKAP1, ALF1) Genomic Order:  2935
Name:  ? Sobic.006G280600 Secondary Identifier:  ? PAC:37946852
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G280600 0.5kb upstream 0.5kb upstream 3573 true Chr06: 61065794-61069366 Sorghum bicolor
Sobic.006G280600 0.5kb upstream 0.5kb upstream 500 false Chr06: 61068867-61069366 Sorghum bicolor
Sobic.006G280600 0.5kb downstream 0.5kb downstream 3573 true Chr06: 61065294-61068866 Sorghum bicolor
Sobic.006G280600 0.5kb downstream 0.5kb downstream 500 false Chr06: 61065294-61065793 Sorghum bicolor
Sobic.006G280600 1.0kb upstream 1.0kb upstream 4073 true Chr06: 61065794-61069866 Sorghum bicolor
Sobic.006G280600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 61068867-61069866 Sorghum bicolor
Sobic.006G280600 1.0kb downstream 1.0kb downstream 4073 true Chr06: 61064794-61068866 Sorghum bicolor
Sobic.006G280600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 61064794-61065793 Sorghum bicolor
Sobic.006G280600 2.0kb upstream 2.0kb upstream 5073 true Chr06: 61065794-61070866 Sorghum bicolor
Sobic.006G280600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 61068867-61070866 Sorghum bicolor
Sobic.006G280600 2.0kb downstream 2.0kb downstream 5073 true Chr06: 61063794-61068866 Sorghum bicolor
Sobic.006G280600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 61063794-61065793 Sorghum bicolor
Sobic.006G280600 5.0kb upstream 5.0kb upstream 8073 true Chr06: 61065794-61073866 Sorghum bicolor
Sobic.006G280600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 61068867-61073866 Sorghum bicolor
Sobic.006G280600 5.0kb downstream 5.0kb downstream 8073 true Chr06: 61060794-61068866 Sorghum bicolor
Sobic.006G280600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 61060794-61065793 Sorghum bicolor
Sobic.006G280600 10.0kb upstream 10.0kb upstream 13073 true Chr06: 61065794-61078866 Sorghum bicolor
Sobic.006G280600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 61068867-61078866 Sorghum bicolor
Sobic.006G280600 10.0kb downstream 10.0kb downstream 13073 true Chr06: 61055794-61068866 Sorghum bicolor
Sobic.006G280600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 61055794-61065793 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178759 5267 Panicoideae View MSA
124575162 5269 Grass View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.605       High
cufflinks 1.208       Low
cufflinks 3.001        
cufflinks 4.987        
cufflinks 4.862        
cufflinks 4.503        
cufflinks 2.408        
cufflinks 1.532       Low
cufflinks 6.091       High
cufflinks 5.13        
cufflinks 2.809        
cufflinks 2.979        
cufflinks 4.836        
cufflinks 3.955        
cufflinks 3.506        
cufflinks 2.437        
cufflinks 2.554        
cufflinks 2.774        
cufflinks 3.736        
cufflinks 3.634        
cufflinks 3.741        
cufflinks 5.588        
cufflinks 3.682        
cufflinks 3.647        
cufflinks 1.899       Low
cufflinks 0.93       Low
cufflinks 4.843        
cufflinks 2.093       Low
cufflinks 3.853        
cufflinks 4.084        

0 Strain