Gene : Sobic.006G234400 S. bicolor v3.1.1
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  2445
Name:  ? Sobic.006G234400 Secondary Identifier:  ? PAC:37946923
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G234400 0.5kb upstream 0.5kb upstream 2830 true Chr06: 57587679-57590508 Sorghum bicolor
Sobic.006G234400 0.5kb upstream 0.5kb upstream 500 false Chr06: 57587679-57588178 Sorghum bicolor
Sobic.006G234400 0.5kb downstream 0.5kb downstream 2830 true Chr06: 57588179-57591008 Sorghum bicolor
Sobic.006G234400 0.5kb downstream 0.5kb downstream 500 false Chr06: 57590509-57591008 Sorghum bicolor
Sobic.006G234400 1.0kb upstream 1.0kb upstream 3330 true Chr06: 57587179-57590508 Sorghum bicolor
Sobic.006G234400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57587179-57588178 Sorghum bicolor
Sobic.006G234400 1.0kb downstream 1.0kb downstream 3330 true Chr06: 57588179-57591508 Sorghum bicolor
Sobic.006G234400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57590509-57591508 Sorghum bicolor
Sobic.006G234400 2.0kb upstream 2.0kb upstream 4330 true Chr06: 57586179-57590508 Sorghum bicolor
Sobic.006G234400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57586179-57588178 Sorghum bicolor
Sobic.006G234400 2.0kb downstream 2.0kb downstream 4330 true Chr06: 57588179-57592508 Sorghum bicolor
Sobic.006G234400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57590509-57592508 Sorghum bicolor
Sobic.006G234400 5.0kb upstream 5.0kb upstream 7330 true Chr06: 57583179-57590508 Sorghum bicolor
Sobic.006G234400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57583179-57588178 Sorghum bicolor
Sobic.006G234400 5.0kb downstream 5.0kb downstream 7330 true Chr06: 57588179-57595508 Sorghum bicolor
Sobic.006G234400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57590509-57595508 Sorghum bicolor
Sobic.006G234400 10.0kb upstream 10.0kb upstream 12330 true Chr06: 57578179-57590508 Sorghum bicolor
Sobic.006G234400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57578179-57588178 Sorghum bicolor
Sobic.006G234400 10.0kb downstream 10.0kb downstream 12330 true Chr06: 57588179-57600508 Sorghum bicolor
Sobic.006G234400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57590509-57600508 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192905 5267 Panicoideae View MSA
124578086 5269 Grass View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.084     Low  
cufflinks 0.019     Low  
cufflinks 1.194       High
cufflinks 0.247        
cufflinks 0.153        
cufflinks 0.371        
cufflinks 0.031     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 4.021       High
cufflinks 0.038     Low  
cufflinks 0.054     Low  
cufflinks 0.024     Low  
cufflinks 0.11        
cufflinks 0.008     Low  
cufflinks 3.46       High
cufflinks 0.02     Low  
cufflinks 0.006     Low Low
cufflinks 0.01     Low  
cufflinks 0.025     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 4.154       High

0 Strain