Gene : Sobic.006G220500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10578//PTHR10578:SF74 - S -2-HYDROXY-ACID OXIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2304
Name:  ? Sobic.006G220500 Secondary Identifier:  ? PAC:37949362
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G220500 0.5kb upstream 0.5kb upstream 5054 true Chr06: 56741401-56746454 Sorghum bicolor
Sobic.006G220500 0.5kb upstream 0.5kb upstream 500 false Chr06: 56741401-56741900 Sorghum bicolor
Sobic.006G220500 0.5kb downstream 0.5kb downstream 5054 true Chr06: 56741901-56746954 Sorghum bicolor
Sobic.006G220500 0.5kb downstream 0.5kb downstream 500 false Chr06: 56746455-56746954 Sorghum bicolor
Sobic.006G220500 1.0kb upstream 1.0kb upstream 5554 true Chr06: 56740901-56746454 Sorghum bicolor
Sobic.006G220500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56740901-56741900 Sorghum bicolor
Sobic.006G220500 1.0kb downstream 1.0kb downstream 5554 true Chr06: 56741901-56747454 Sorghum bicolor
Sobic.006G220500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56746455-56747454 Sorghum bicolor
Sobic.006G220500 2.0kb upstream 2.0kb upstream 6554 true Chr06: 56739901-56746454 Sorghum bicolor
Sobic.006G220500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56739901-56741900 Sorghum bicolor
Sobic.006G220500 2.0kb downstream 2.0kb downstream 6554 true Chr06: 56741901-56748454 Sorghum bicolor
Sobic.006G220500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56746455-56748454 Sorghum bicolor
Sobic.006G220500 5.0kb upstream 5.0kb upstream 9554 true Chr06: 56736901-56746454 Sorghum bicolor
Sobic.006G220500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56736901-56741900 Sorghum bicolor
Sobic.006G220500 5.0kb downstream 5.0kb downstream 9554 true Chr06: 56741901-56751454 Sorghum bicolor
Sobic.006G220500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56746455-56751454 Sorghum bicolor
Sobic.006G220500 10.0kb upstream 10.0kb upstream 14554 true Chr06: 56731901-56746454 Sorghum bicolor
Sobic.006G220500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56731901-56741900 Sorghum bicolor
Sobic.006G220500 10.0kb downstream 10.0kb downstream 14554 true Chr06: 56741901-56756454 Sorghum bicolor
Sobic.006G220500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56746455-56756454 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189781 5267 Panicoideae View MSA
124570944 5269 Grass View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.771        
cufflinks 0.121       Low
cufflinks 0.947        
cufflinks 0.727        
cufflinks 2.444        
cufflinks 0.053     Low Low
cufflinks 0.626        
cufflinks 0.038     Low Low
cufflinks 2.781        
cufflinks 5.017       High
cufflinks 5.68       High
cufflinks 4.249        
cufflinks 0.247        
cufflinks 4.344        
cufflinks 0.931        
cufflinks 1.039        
cufflinks 0.628        
cufflinks 0.669        
cufflinks 0.203        
cufflinks 0.92        
cufflinks 4.132        
cufflinks 5.653       High
cufflinks 4.978        
cufflinks 4.885        
cufflinks 0.089       Low
cufflinks 0.024     Low Low
cufflinks 4.255        
cufflinks 2.607        
cufflinks 0.028     Low Low
cufflinks 1.765        

0 Strain