Gene : Sobic.006G222500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2325
Name:  ? Sobic.006G222500 Secondary Identifier:  ? PAC:37948007
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G222500 0.5kb upstream 0.5kb upstream 5426 true Chr06: 56884507-56889932 Sorghum bicolor
Sobic.006G222500 0.5kb upstream 0.5kb upstream 500 false Chr06: 56884507-56885006 Sorghum bicolor
Sobic.006G222500 0.5kb downstream 0.5kb downstream 5426 true Chr06: 56885007-56890432 Sorghum bicolor
Sobic.006G222500 0.5kb downstream 0.5kb downstream 500 false Chr06: 56889933-56890432 Sorghum bicolor
Sobic.006G222500 1.0kb upstream 1.0kb upstream 5926 true Chr06: 56884007-56889932 Sorghum bicolor
Sobic.006G222500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56884007-56885006 Sorghum bicolor
Sobic.006G222500 1.0kb downstream 1.0kb downstream 5926 true Chr06: 56885007-56890932 Sorghum bicolor
Sobic.006G222500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56889933-56890932 Sorghum bicolor
Sobic.006G222500 2.0kb upstream 2.0kb upstream 6926 true Chr06: 56883007-56889932 Sorghum bicolor
Sobic.006G222500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56883007-56885006 Sorghum bicolor
Sobic.006G222500 2.0kb downstream 2.0kb downstream 6926 true Chr06: 56885007-56891932 Sorghum bicolor
Sobic.006G222500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56889933-56891932 Sorghum bicolor
Sobic.006G222500 5.0kb upstream 5.0kb upstream 9926 true Chr06: 56880007-56889932 Sorghum bicolor
Sobic.006G222500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56880007-56885006 Sorghum bicolor
Sobic.006G222500 5.0kb downstream 5.0kb downstream 9926 true Chr06: 56885007-56894932 Sorghum bicolor
Sobic.006G222500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56889933-56894932 Sorghum bicolor
Sobic.006G222500 10.0kb upstream 10.0kb upstream 14926 true Chr06: 56875007-56889932 Sorghum bicolor
Sobic.006G222500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56875007-56885006 Sorghum bicolor
Sobic.006G222500 10.0kb downstream 10.0kb downstream 14926 true Chr06: 56885007-56899932 Sorghum bicolor
Sobic.006G222500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56889933-56899932 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196830 5267 Panicoideae View MSA
124578069 5269 Grass View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2        
cufflinks 1.824       Low
cufflinks 4.632        
cufflinks 6.393        
cufflinks 10.757        
cufflinks 6.744        
cufflinks 6.574        
cufflinks 2.571       Low
cufflinks 13.706     High  
cufflinks 14.522     High  
cufflinks 10.949        
cufflinks 12.486     High  
cufflinks 14.091     High  
cufflinks 14.172     High  
cufflinks 11.179        
cufflinks 2.793       Low
cufflinks 7.198        
cufflinks 6.097        
cufflinks 6.068        
cufflinks 8.775        
cufflinks 8.617        
cufflinks 16.368     High High
cufflinks 14.799     High  
cufflinks 15.769     High High
cufflinks 3.375       Low
cufflinks 1.784       Low
cufflinks 8.848        
cufflinks 3.572       Low
cufflinks 5.845        
cufflinks 8.763        

0 Strain