Gene : Sobic.006G223500 S. bicolor v3.1.1
Defline:  (1 of 2) 3.6.3.41 - Heme-transporting ATPase Genomic Order:  2336
Name:  ? Sobic.006G223500 Secondary Identifier:  ? PAC:37949200
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G223500 0.5kb upstream 0.5kb upstream 4221 true Chr06: 56958928-56963148 Sorghum bicolor
Sobic.006G223500 0.5kb upstream 0.5kb upstream 500 false Chr06: 56962649-56963148 Sorghum bicolor
Sobic.006G223500 0.5kb downstream 0.5kb downstream 4221 true Chr06: 56958428-56962648 Sorghum bicolor
Sobic.006G223500 0.5kb downstream 0.5kb downstream 500 false Chr06: 56958428-56958927 Sorghum bicolor
Sobic.006G223500 1.0kb upstream 1.0kb upstream 4721 true Chr06: 56958928-56963648 Sorghum bicolor
Sobic.006G223500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56962649-56963648 Sorghum bicolor
Sobic.006G223500 1.0kb downstream 1.0kb downstream 4721 true Chr06: 56957928-56962648 Sorghum bicolor
Sobic.006G223500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56957928-56958927 Sorghum bicolor
Sobic.006G223500 2.0kb upstream 2.0kb upstream 5721 true Chr06: 56958928-56964648 Sorghum bicolor
Sobic.006G223500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56962649-56964648 Sorghum bicolor
Sobic.006G223500 2.0kb downstream 2.0kb downstream 5721 true Chr06: 56956928-56962648 Sorghum bicolor
Sobic.006G223500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56956928-56958927 Sorghum bicolor
Sobic.006G223500 5.0kb upstream 5.0kb upstream 8721 true Chr06: 56958928-56967648 Sorghum bicolor
Sobic.006G223500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56962649-56967648 Sorghum bicolor
Sobic.006G223500 5.0kb downstream 5.0kb downstream 8721 true Chr06: 56953928-56962648 Sorghum bicolor
Sobic.006G223500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56953928-56958927 Sorghum bicolor
Sobic.006G223500 10.0kb upstream 10.0kb upstream 13721 true Chr06: 56958928-56972648 Sorghum bicolor
Sobic.006G223500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56962649-56972648 Sorghum bicolor
Sobic.006G223500 10.0kb downstream 10.0kb downstream 13721 true Chr06: 56948928-56962648 Sorghum bicolor
Sobic.006G223500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56948928-56958927 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040954 5273 Angiosperm View MSA
122176760 5267 Panicoideae View MSA
124569129 5269 Grass View MSA
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.077       High
cufflinks 0.073       Low
cufflinks 0.147       Low
cufflinks 0.188        
cufflinks 0.533        
cufflinks 0.397        
cufflinks 0.435        
cufflinks 0.197        
cufflinks 0.48        
cufflinks 0.463        
cufflinks 0.361        
cufflinks 0.394        
cufflinks 0.342        
cufflinks 0.569        
cufflinks 0.319        
cufflinks 0.13       Low
cufflinks 0.336        
cufflinks 0.369        
cufflinks 0.099       Low
cufflinks 0.433        
cufflinks 0.69        
cufflinks 0.645        
cufflinks 0.458        
cufflinks 0.611        
cufflinks 0.11       Low
cufflinks 0.099       Low
cufflinks 0.355        
cufflinks 0.396        
cufflinks 0.431        
cufflinks 0.487        

0 Strain